Cluster: MGYG000002836_CGC42
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002836
- CGC Family ID: CGCFAM_00263
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002836_17 | MGYG000002836_17_18 | 16896 | 17945 | + | GH179 |
| CAZyme | MGYG000002836_17 | MGYG000002836_17_19 | 17938 | 18951 | + | GH179 |
| pfam | MGYG000002836_17 | MGYG000002836_17_20 | 18952 | 19929 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| TC | MGYG000002836_17 | MGYG000002836_17_21 | 20160 | 21485 | + | 3.A.1.1.41 |
Gene ID: MGYG000002836_17_18
Type: CAZyme
Location: 16896 - 17945 (+)
Type: CAZyme
Location: 16896 - 17945 (+)
Gene ID: MGYG000002836_17_19
Type: CAZyme
Location: 17938 - 18951 (+)
Type: CAZyme
Location: 17938 - 18951 (+)
Gene ID: MGYG000002836_17_20
Type: pfam
Location: 18952 - 19929 (+)
Type: pfam
Location: 18952 - 19929 (+)
Gene ID: MGYG000002836_17_21
Type: TC
Location: 20160 - 21485 (+)
Type: TC
Location: 20160 - 21485 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerocolumna
Species
Anaerocolumna aminovalerica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.