Cluster: MGYG000002836_CGC37
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000002836
- CGC Family ID: CGCFAM_08659
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002836_14 | MGYG000002836_14_44 | 55091 | 56278 | - | CE9 |
| pfam | MGYG000002836_14 | MGYG000002836_14_45 | 56342 | 57067 | - | Glucosamine_iso |
| TF | MGYG000002836_14 | MGYG000002836_14_46 | 57294 | 58154 | + | HTH_AraC | HTH_AraC |
| TC | MGYG000002836_14 | MGYG000002836_14_47 | 58156 | 58989 | - | 3.A.1.1.34 |
| TC | MGYG000002836_14 | MGYG000002836_14_48 | 58979 | 59857 | - | 3.A.1.1.11 |
| STP | MGYG000002836_14 | MGYG000002836_14_49 | 60044 | 61417 | - | SBP_bac_1 |
| CAZyme | MGYG000002836_14 | MGYG000002836_14_50 | 61464 | 62690 | - | GH177 |
| CAZyme | MGYG000002836_14 | MGYG000002836_14_51 | 62890 | 64866 | - | CE19 |
Gene ID: MGYG000002836_14_44
Type: CAZyme
Location: 55091 - 56278 (-)
Type: CAZyme
Location: 55091 - 56278 (-)
Gene ID: MGYG000002836_14_45
Type: pfam
Location: 56342 - 57067 (-)
Type: pfam
Location: 56342 - 57067 (-)
Gene ID: MGYG000002836_14_46
Type: TF
Location: 57294 - 58154 (+)
Type: TF
Location: 57294 - 58154 (+)
Gene ID: MGYG000002836_14_47
Type: TC
Location: 58156 - 58989 (-)
Type: TC
Location: 58156 - 58989 (-)
Gene ID: MGYG000002836_14_48
Type: TC
Location: 58979 - 59857 (-)
Type: TC
Location: 58979 - 59857 (-)
Gene ID: MGYG000002836_14_49
Type: STP
Location: 60044 - 61417 (-)
Type: STP
Location: 60044 - 61417 (-)
Gene ID: MGYG000002836_14_50
Type: CAZyme
Location: 61464 - 62690 (-)
Type: CAZyme
Location: 61464 - 62690 (-)
Gene ID: MGYG000002836_14_51
Type: CAZyme
Location: 62890 - 64866 (-)
Type: CAZyme
Location: 62890 - 64866 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerocolumna
Species
Anaerocolumna aminovalerica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.