Cluster: MGYG000002836_CGC35
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002836
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002836_11 | MGYG000002836_11_42 | 52446 | 53570 | + | CE9 |
| pfam | MGYG000002836_11 | MGYG000002836_11_43 | 53680 | 54195 | - | Acetyltransf_1 | FR47 | Acetyltransf_3 | Acetyltransf_4 | Acetyltransf_7 | Acetyltransf_10 |
| TC | MGYG000002836_11 | MGYG000002836_11_44 | 54274 | 54894 | - | 9.B.27.2.5 |
| TC | MGYG000002836_11 | MGYG000002836_11_45 | 55069 | 55602 | + | 2.A.115.1.6 |
| STP | MGYG000002836_11 | MGYG000002836_11_46 | 55832 | 56035 | + | HMA |
| STP | MGYG000002836_11 | MGYG000002836_11_47 | 56205 | 57449 | + | Pyr_redox_2 |
| TC | MGYG000002836_11 | MGYG000002836_11_48 | 57938 | 60613 | + | 3.A.3.2.21 |
Gene ID: MGYG000002836_11_42
Type: CAZyme
Location: 52446 - 53570 (+)
Type: CAZyme
Location: 52446 - 53570 (+)
Gene ID: MGYG000002836_11_43
Type: pfam
Location: 53680 - 54195 (-)
Type: pfam
Location: 53680 - 54195 (-)
Gene ID: MGYG000002836_11_44
Type: TC
Location: 54274 - 54894 (-)
Type: TC
Location: 54274 - 54894 (-)
Gene ID: MGYG000002836_11_45
Type: TC
Location: 55069 - 55602 (+)
Type: TC
Location: 55069 - 55602 (+)
Gene ID: MGYG000002836_11_46
Type: STP
Location: 55832 - 56035 (+)
Type: STP
Location: 55832 - 56035 (+)
Gene ID: MGYG000002836_11_47
Type: STP
Location: 56205 - 57449 (+)
Type: STP
Location: 56205 - 57449 (+)
Gene ID: MGYG000002836_11_48
Type: TC
Location: 57938 - 60613 (+)
Type: TC
Location: 57938 - 60613 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerocolumna
Species
Anaerocolumna aminovalerica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.