Cluster: MGYG000002836_CGC31
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002836
- CGC Family ID: CGCFAM_02887
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002836_10 | MGYG000002836_10_38 | 40061 | 41107 | - | GH170 |
| STP | MGYG000002836_10 | MGYG000002836_10_39 | 41104 | 42009 | - | SIS |
| TC | MGYG000002836_10 | MGYG000002836_10_40 | 42011 | 42349 | - | 4.A.3.2.9 |
| TC | MGYG000002836_10 | MGYG000002836_10_41 | 42353 | 42655 | - | 4.A.3.2.6 |
| STP | MGYG000002836_10 | MGYG000002836_10_42 | 42682 | 43356 | - | PIG-L |
| pfam | MGYG000002836_10 | MGYG000002836_10_43 | 43369 | 44313 | - | Acetyltransf_1 | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_7 | Acetyltransf_10 |
| TC | MGYG000002836_10 | MGYG000002836_10_44 | 44313 | 45656 | - | 4.A.3.2.8 |
Gene ID: MGYG000002836_10_38
Type: CAZyme
Location: 40061 - 41107 (-)
Type: CAZyme
Location: 40061 - 41107 (-)
Gene ID: MGYG000002836_10_39
Type: STP
Location: 41104 - 42009 (-)
Type: STP
Location: 41104 - 42009 (-)
Gene ID: MGYG000002836_10_40
Type: TC
Location: 42011 - 42349 (-)
Type: TC
Location: 42011 - 42349 (-)
Gene ID: MGYG000002836_10_41
Type: TC
Location: 42353 - 42655 (-)
Type: TC
Location: 42353 - 42655 (-)
Gene ID: MGYG000002836_10_42
Type: STP
Location: 42682 - 43356 (-)
Type: STP
Location: 42682 - 43356 (-)
Gene ID: MGYG000002836_10_43
Type: pfam
Location: 43369 - 44313 (-)
Type: pfam
Location: 43369 - 44313 (-)
Gene ID: MGYG000002836_10_44
Type: TC
Location: 44313 - 45656 (-)
Type: TC
Location: 44313 - 45656 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerocolumna
Species
Anaerocolumna aminovalerica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.