Cluster: MGYG000002836_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002836
- CGC Family ID: CGCFAM_00121
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002836_1 | MGYG000002836_1_61 | 73057 | 73905 | - | 3.A.1.1.18 |
| TC | MGYG000002836_1 | MGYG000002836_1_62 | 73922 | 74803 | - | 3.A.1.1.7 |
| STP | MGYG000002836_1 | MGYG000002836_1_63 | 75084 | 76430 | - | SBP_bac_1 |
| TC | MGYG000002836_1 | MGYG000002836_1_64 | 76675 | 78594 | - | 8.A.59.2.1 |
| pfam | MGYG000002836_1 | MGYG000002836_1_65 | 78824 | 80230 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | MGYG000002836_1 | MGYG000002836_1_66 | 80341 | 82731 | - | GH94 |
| TC | MGYG000002836_1 | MGYG000002836_1_67 | 83054 | 84367 | - | 2.A.85.4.3 |
Gene ID: MGYG000002836_1_61
Type: TC
Location: 73057 - 73905 (-)
Type: TC
Location: 73057 - 73905 (-)
Gene ID: MGYG000002836_1_62
Type: TC
Location: 73922 - 74803 (-)
Type: TC
Location: 73922 - 74803 (-)
Gene ID: MGYG000002836_1_63
Type: STP
Location: 75084 - 76430 (-)
Type: STP
Location: 75084 - 76430 (-)
Gene ID: MGYG000002836_1_64
Type: TC
Location: 76675 - 78594 (-)
Type: TC
Location: 76675 - 78594 (-)
Gene ID: MGYG000002836_1_65
Type: pfam
Location: 78824 - 80230 (-)
Type: pfam
Location: 78824 - 80230 (-)
Gene ID: MGYG000002836_1_66
Type: CAZyme
Location: 80341 - 82731 (-)
Type: CAZyme
Location: 80341 - 82731 (-)
Gene ID: MGYG000002836_1_67
Type: TC
Location: 83054 - 84367 (-)
Type: TC
Location: 83054 - 84367 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerocolumna
Species
Anaerocolumna aminovalerica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.