Cluster: MGYG000002836_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002836
- CGC Family ID: CGCFAM_01156
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002836_9 | MGYG000002836_9_15 | 19039 | 20424 | + | 2.A.66.1.28 |
| pfam | MGYG000002836_9 | MGYG000002836_9_16 | 20683 | 22770 | + | KH_1 | S1 | RNase_PH | RNase_PH | RNase_PH_C | RNase_PH_C | PNPase |
| NULL(UNKNOWN) | MGYG000002836_9 | MGYG000002836_9_17 | 23045 | 23494 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002836_9 | MGYG000002836_9_18 | 23679 | 26480 | + | GH3 |
Gene ID: MGYG000002836_9_15
Type: TC
Location: 19039 - 20424 (+)
Type: TC
Location: 19039 - 20424 (+)
Gene ID: MGYG000002836_9_16
Type: pfam
Location: 20683 - 22770 (+)
Type: pfam
Location: 20683 - 22770 (+)
Gene ID: MGYG000002836_9_17
Type:
Location: 23045 - 23494 (+)
Type:
Location: 23045 - 23494 (+)
Gene ID: MGYG000002836_9_18
Type: CAZyme
Location: 23679 - 26480 (+)
Type: CAZyme
Location: 23679 - 26480 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerocolumna
Species
Anaerocolumna aminovalerica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002836_9_16 | vegan > omnivore | 1.16820 | 0.04449 |