Cluster: MGYG000002836_CGC22
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 8
- Substrate:
- Genome ID: MGYG000002836
- CGC Family ID: CGCFAM_00098
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002836_5 | MGYG000002836_5_151 | 161317 | 161868 | - | GH13_31 |
| CAZyme | MGYG000002836_5 | MGYG000002836_5_152 | 161904 | 163520 | - | GH13_31 |
| CAZyme | MGYG000002836_5 | MGYG000002836_5_153 | 163711 | 165660 | - | GH133 |
| CAZyme | MGYG000002836_5 | MGYG000002836_5_154 | 165849 | 167573 | - | GH13_36 |
| CAZyme | MGYG000002836_5 | MGYG000002836_5_155 | 167651 | 170482 | - | CBM41 | GH13_14 |
| TC | MGYG000002836_5 | MGYG000002836_5_156 | 170523 | 171395 | - | 3.A.1.1.27 |
| TC | MGYG000002836_5 | MGYG000002836_5_157 | 171395 | 172789 | - | 3.A.1.1.27 |
| pfam | MGYG000002836_5 | MGYG000002836_5_158 | 172985 | 174280 | - | SBP_bac_8 |
| CAZyme | MGYG000002836_5 | MGYG000002836_5_159 | 174462 | 176711 | - | GT35 |
| CAZyme | MGYG000002836_5 | MGYG000002836_5_160 | 176733 | 178184 | - | GH77 |
| CAZyme | MGYG000002836_5 | MGYG000002836_5_161 | 178353 | 180104 | - | CBM34 | GH13_20 |
Gene ID: MGYG000002836_5_151
Type: CAZyme
Location: 161317 - 161868 (-)
Type: CAZyme
Location: 161317 - 161868 (-)
Gene ID: MGYG000002836_5_152
Type: CAZyme
Location: 161904 - 163520 (-)
Type: CAZyme
Location: 161904 - 163520 (-)
Gene ID: MGYG000002836_5_153
Type: CAZyme
Location: 163711 - 165660 (-)
Type: CAZyme
Location: 163711 - 165660 (-)
Gene ID: MGYG000002836_5_154
Type: CAZyme
Location: 165849 - 167573 (-)
Type: CAZyme
Location: 165849 - 167573 (-)
Gene ID: MGYG000002836_5_155
Type: CAZyme
Location: 167651 - 170482 (-)
Type: CAZyme
Location: 167651 - 170482 (-)
Gene ID: MGYG000002836_5_156
Type: TC
Location: 170523 - 171395 (-)
Type: TC
Location: 170523 - 171395 (-)
Gene ID: MGYG000002836_5_157
Type: TC
Location: 171395 - 172789 (-)
Type: TC
Location: 171395 - 172789 (-)
Gene ID: MGYG000002836_5_158
Type: pfam
Location: 172985 - 174280 (-)
Type: pfam
Location: 172985 - 174280 (-)
Gene ID: MGYG000002836_5_159
Type: CAZyme
Location: 174462 - 176711 (-)
Type: CAZyme
Location: 174462 - 176711 (-)
Gene ID: MGYG000002836_5_160
Type: CAZyme
Location: 176733 - 178184 (-)
Type: CAZyme
Location: 176733 - 178184 (-)
Gene ID: MGYG000002836_5_161
Type: CAZyme
Location: 178353 - 180104 (-)
Type: CAZyme
Location: 178353 - 180104 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerocolumna
Species
Anaerocolumna aminovalerica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.