Cluster: MGYG000002836_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002836
- CGC Family ID: CGCFAM_00847
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002836_4 | MGYG000002836_4_87 | 98667 | 100190 | - | 3.A.1.121.3 |
| CAZyme | MGYG000002836_4 | MGYG000002836_4_88 | 100646 | 102820 | - | GH112 |
| pfam | MGYG000002836_4 | MGYG000002836_4_89 | 102941 | 103117 | - | DUF6903 |
| TC | MGYG000002836_4 | MGYG000002836_4_90 | 103200 | 104069 | - | 3.A.1.1.18 |
| TC | MGYG000002836_4 | MGYG000002836_4_91 | 104082 | 104972 | - | 3.A.1.1.20 |
Gene ID: MGYG000002836_4_87
Type: TC
Location: 98667 - 100190 (-)
Type: TC
Location: 98667 - 100190 (-)
Gene ID: MGYG000002836_4_88
Type: CAZyme
Location: 100646 - 102820 (-)
Type: CAZyme
Location: 100646 - 102820 (-)
Gene ID: MGYG000002836_4_89
Type: pfam
Location: 102941 - 103117 (-)
Type: pfam
Location: 102941 - 103117 (-)
Gene ID: MGYG000002836_4_90
Type: TC
Location: 103200 - 104069 (-)
Type: TC
Location: 103200 - 104069 (-)
Gene ID: MGYG000002836_4_91
Type: TC
Location: 104082 - 104972 (-)
Type: TC
Location: 104082 - 104972 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerocolumna
Species
Anaerocolumna aminovalerica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.