Cluster: MGYG000002836_CGC10
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000002836
- CGC Family ID: CGCFAM_00278
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002836_2 | MGYG000002836_2_138 | 151510 | 154284 | + | CBM32 | GH85 |
| CAZyme | MGYG000002836_2 | MGYG000002836_2_139 | 154300 | 155592 | + | GH125 |
| CAZyme | MGYG000002836_2 | MGYG000002836_2_140 | 155718 | 158837 | + | GH38 |
| pfam | MGYG000002836_2 | MGYG000002836_2_141 | 158957 | 159625 | + | DUF624 |
| TC | MGYG000002836_2 | MGYG000002836_2_142 | 159685 | 161403 | + | 8.A.59.2.1 |
| TF | MGYG000002836_2 | MGYG000002836_2_143 | 161381 | 162898 | + | HTH_AraC | HTH_AraC |
| TC | MGYG000002836_2 | MGYG000002836_2_144 | 163037 | 163990 | + | 3.A.1.1.29 |
| TC | MGYG000002836_2 | MGYG000002836_2_145 | 164006 | 164965 | + | 3.A.1.1.29 |
| STP | MGYG000002836_2 | MGYG000002836_2_146 | 165130 | 166620 | + | SBP_bac_1 |
| CAZyme | MGYG000002836_2 | MGYG000002836_2_147 | 166705 | 169149 | + | GH2 |
Gene ID: MGYG000002836_2_138
Type: CAZyme
Location: 151510 - 154284 (+)
Type: CAZyme
Location: 151510 - 154284 (+)
Gene ID: MGYG000002836_2_139
Type: CAZyme
Location: 154300 - 155592 (+)
Type: CAZyme
Location: 154300 - 155592 (+)
Gene ID: MGYG000002836_2_140
Type: CAZyme
Location: 155718 - 158837 (+)
Type: CAZyme
Location: 155718 - 158837 (+)
Gene ID: MGYG000002836_2_141
Type: pfam
Location: 158957 - 159625 (+)
Type: pfam
Location: 158957 - 159625 (+)
Gene ID: MGYG000002836_2_142
Type: TC
Location: 159685 - 161403 (+)
Type: TC
Location: 159685 - 161403 (+)
Gene ID: MGYG000002836_2_143
Type: TF
Location: 161381 - 162898 (+)
Type: TF
Location: 161381 - 162898 (+)
Gene ID: MGYG000002836_2_144
Type: TC
Location: 163037 - 163990 (+)
Type: TC
Location: 163037 - 163990 (+)
Gene ID: MGYG000002836_2_145
Type: TC
Location: 164006 - 164965 (+)
Type: TC
Location: 164006 - 164965 (+)
Gene ID: MGYG000002836_2_146
Type: STP
Location: 165130 - 166620 (+)
Type: STP
Location: 165130 - 166620 (+)
Gene ID: MGYG000002836_2_147
Type: CAZyme
Location: 166705 - 169149 (+)
Type: CAZyme
Location: 166705 - 169149 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerocolumna
Species
Anaerocolumna aminovalerica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.