Cluster: MGYG000002825_CGC62
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002825
- CGC Family ID: CGCFAM_04730
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002825_30 | MGYG000002825_30_5 | 4219 | 4767 | + | 4.F.1.1.8 |
| NULL(UNKNOWN) | MGYG000002825_30 | MGYG000002825_30_6 | 4898 | 5371 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002825_30 | MGYG000002825_30_7 | 5541 | 7289 | - | GH37 |
| TC | MGYG000002825_30 | MGYG000002825_30_8 | 8085 | 8987 | + | 9.B.34.1.2 |
| TF | MGYG000002825_30 | MGYG000002825_30_9 | 8999 | 9832 | - | HTH_AraC |
| pfam | MGYG000002825_30 | MGYG000002825_30_10 | 10085 | 10852 | + | PhyH |
| TC | MGYG000002825_30 | MGYG000002825_30_11 | 11708 | 12049 | - | 4.A.2.1.10 |
| pfam | MGYG000002825_30 | MGYG000002825_30_12 | 12065 | 12940 | - | Radical_SAM | Fer4_12 |
| pfam | MGYG000002825_30 | MGYG000002825_30_13 | 12906 | 15203 | - | Gly_radical | PFL-like |
| TC | MGYG000002825_30 | MGYG000002825_30_14 | 15256 | 15576 | - | 4.A.2.1.10 |
| TC | MGYG000002825_30 | MGYG000002825_30_15 | 15597 | 16673 | - | 4.A.2.1.10 |
| TC | MGYG000002825_30 | MGYG000002825_30_16 | 16984 | 19485 | + | 4.A.2.1.10 |
Gene ID: MGYG000002825_30_5
Type: TC
Location: 4219 - 4767 (+)
Type: TC
Location: 4219 - 4767 (+)
Gene ID: MGYG000002825_30_6
Type:
Location: 4898 - 5371 (-)
Type:
Location: 4898 - 5371 (-)
Gene ID: MGYG000002825_30_7
Type: CAZyme
Location: 5541 - 7289 (-)
Type: CAZyme
Location: 5541 - 7289 (-)
Gene ID: MGYG000002825_30_8
Type: TC
Location: 8085 - 8987 (+)
Type: TC
Location: 8085 - 8987 (+)
Gene ID: MGYG000002825_30_9
Type: TF
Location: 8999 - 9832 (-)
Type: TF
Location: 8999 - 9832 (-)
Gene ID: MGYG000002825_30_10
Type: pfam
Location: 10085 - 10852 (+)
Type: pfam
Location: 10085 - 10852 (+)
Gene ID: MGYG000002825_30_11
Type: TC
Location: 11708 - 12049 (-)
Type: TC
Location: 11708 - 12049 (-)
Gene ID: MGYG000002825_30_12
Type: pfam
Location: 12065 - 12940 (-)
Type: pfam
Location: 12065 - 12940 (-)
Gene ID: MGYG000002825_30_13
Type: pfam
Location: 12906 - 15203 (-)
Type: pfam
Location: 12906 - 15203 (-)
Gene ID: MGYG000002825_30_14
Type: TC
Location: 15256 - 15576 (-)
Type: TC
Location: 15256 - 15576 (-)
Gene ID: MGYG000002825_30_15
Type: TC
Location: 15597 - 16673 (-)
Type: TC
Location: 15597 - 16673 (-)
Gene ID: MGYG000002825_30_16
Type: TC
Location: 16984 - 19485 (+)
Type: TC
Location: 16984 - 19485 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella indica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.