Cluster: MGYG000002825_CGC6
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000002825
- CGC Family ID: CGCFAM_04732
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002825_2 | MGYG000002825_2_97 | 112147 | 113649 | + | 2.A.1.6.4 |
| TF | MGYG000002825_2 | MGYG000002825_2_98 | 113700 | 114641 | - | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000002825_2 | MGYG000002825_2_99 | 114880 | 116232 | + | GH4 |
| TC | MGYG000002825_2 | MGYG000002825_2_100 | 116276 | 117760 | + | 2.A.2.1.1 |
| pfam | MGYG000002825_2 | MGYG000002825_2_101 | 117961 | 118266 | - | MerR_2 |
| pfam | MGYG000002825_2 | MGYG000002825_2_102 | 118266 | 119186 | - | DnaJ | DnaJ_C |
| TC | MGYG000002825_2 | MGYG000002825_2_103 | 119337 | 120017 | - | 2.A.109.1.5 |
| pfam | MGYG000002825_2 | MGYG000002825_2_104 | 120240 | 121028 | + | DSBA | Thioredoxin_4 | ScsC_N |
| pfam | MGYG000002825_2 | MGYG000002825_2_105 | 121059 | 121493 | - | PgaD |
| CAZyme | MGYG000002825_2 | MGYG000002825_2_106 | 121493 | 122821 | - | GT2 |
| CAZyme | MGYG000002825_2 | MGYG000002825_2_107 | 122814 | 124829 | - | CE4 | GH153 |
| TC | MGYG000002825_2 | MGYG000002825_2_108 | 124838 | 127285 | - | 1.B.55.1.1 |
| TF | MGYG000002825_2 | MGYG000002825_2_109 | 127889 | 128485 | + | GerE |
| TC | MGYG000002825_2 | MGYG000002825_2_110 | 128855 | 129862 | - | 3.A.1.14.21 |
Gene ID: MGYG000002825_2_97
Type: TC
Location: 112147 - 113649 (+)
Type: TC
Location: 112147 - 113649 (+)
Gene ID: MGYG000002825_2_98
Type: TF
Location: 113700 - 114641 (-)
Type: TF
Location: 113700 - 114641 (-)
Gene ID: MGYG000002825_2_99
Type: CAZyme
Location: 114880 - 116232 (+)
Type: CAZyme
Location: 114880 - 116232 (+)
Gene ID: MGYG000002825_2_100
Type: TC
Location: 116276 - 117760 (+)
Type: TC
Location: 116276 - 117760 (+)
Gene ID: MGYG000002825_2_101
Type: pfam
Location: 117961 - 118266 (-)
Type: pfam
Location: 117961 - 118266 (-)
Gene ID: MGYG000002825_2_102
Type: pfam
Location: 118266 - 119186 (-)
Type: pfam
Location: 118266 - 119186 (-)
Gene ID: MGYG000002825_2_103
Type: TC
Location: 119337 - 120017 (-)
Type: TC
Location: 119337 - 120017 (-)
Gene ID: MGYG000002825_2_104
Type: pfam
Location: 120240 - 121028 (+)
Type: pfam
Location: 120240 - 121028 (+)
Gene ID: MGYG000002825_2_105
Type: pfam
Location: 121059 - 121493 (-)
Type: pfam
Location: 121059 - 121493 (-)
Gene ID: MGYG000002825_2_106
Type: CAZyme
Location: 121493 - 122821 (-)
Type: CAZyme
Location: 121493 - 122821 (-)
Gene ID: MGYG000002825_2_107
Type: CAZyme
Location: 122814 - 124829 (-)
Type: CAZyme
Location: 122814 - 124829 (-)
Gene ID: MGYG000002825_2_108
Type: TC
Location: 124838 - 127285 (-)
Type: TC
Location: 124838 - 127285 (-)
Gene ID: MGYG000002825_2_109
Type: TF
Location: 127889 - 128485 (+)
Type: TF
Location: 127889 - 128485 (+)
Gene ID: MGYG000002825_2_110
Type: TC
Location: 128855 - 129862 (-)
Type: TC
Location: 128855 - 129862 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella indica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.