Cluster: MGYG000002825_CGC49
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002825
- CGC Family ID: CGCFAM_03345
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002825_15 | MGYG000002825_15_86 | 97924 | 98565 | + | 3.A.1.3.8 |
| TC | MGYG000002825_15 | MGYG000002825_15_87 | 98580 | 99245 | + | 3.A.1.3.23 |
| TC | MGYG000002825_15 | MGYG000002825_15_88 | 99238 | 99999 | + | 3.A.1.3.5 |
| pfam | MGYG000002825_15 | MGYG000002825_15_89 | 100102 | 100866 | - | adh_short | KR | adh_short_C2 |
| pfam | MGYG000002825_15 | MGYG000002825_15_90 | 101049 | 102386 | + | Aminotran_3 |
| TC | MGYG000002825_15 | MGYG000002825_15_91 | 102496 | 103200 | - | 3.A.1.5.34 |
| TC | MGYG000002825_15 | MGYG000002825_15_92 | 103187 | 104023 | - | 3.A.1.5.27 |
| TC | MGYG000002825_15 | MGYG000002825_15_93 | 104016 | 104849 | - | 3.A.1.5.38 |
| TC | MGYG000002825_15 | MGYG000002825_15_94 | 104849 | 105898 | - | 3.A.1.5.39 |
| STP | MGYG000002825_15 | MGYG000002825_15_95 | 106013 | 107581 | - | SBP_bac_5 |
| CAZyme | MGYG000002825_15 | MGYG000002825_15_96 | 107955 | 109619 | - | AA3_2 |
| sulfatase | MGYG000002825_15 | MGYG000002825_15_97 | 109634 | 111106 | - | S1_6 |
| STP | MGYG000002825_15 | MGYG000002825_15_98 | 111117 | 111710 | - | TetR_N |
| TC | MGYG000002825_15 | MGYG000002825_15_99 | 111839 | 113872 | + | 2.A.15.1.4 |
| TC | MGYG000002825_15 | MGYG000002825_15_100 | 114096 | 114248 | + | 1.E.53.1.6 |
Gene ID: MGYG000002825_15_86
Type: TC
Location: 97924 - 98565 (+)
Type: TC
Location: 97924 - 98565 (+)
Gene ID: MGYG000002825_15_87
Type: TC
Location: 98580 - 99245 (+)
Type: TC
Location: 98580 - 99245 (+)
Gene ID: MGYG000002825_15_88
Type: TC
Location: 99238 - 99999 (+)
Type: TC
Location: 99238 - 99999 (+)
Gene ID: MGYG000002825_15_89
Type: pfam
Location: 100102 - 100866 (-)
Type: pfam
Location: 100102 - 100866 (-)
Gene ID: MGYG000002825_15_90
Type: pfam
Location: 101049 - 102386 (+)
Type: pfam
Location: 101049 - 102386 (+)
Gene ID: MGYG000002825_15_91
Type: TC
Location: 102496 - 103200 (-)
Type: TC
Location: 102496 - 103200 (-)
Gene ID: MGYG000002825_15_92
Type: TC
Location: 103187 - 104023 (-)
Type: TC
Location: 103187 - 104023 (-)
Gene ID: MGYG000002825_15_93
Type: TC
Location: 104016 - 104849 (-)
Type: TC
Location: 104016 - 104849 (-)
Gene ID: MGYG000002825_15_94
Type: TC
Location: 104849 - 105898 (-)
Type: TC
Location: 104849 - 105898 (-)
Gene ID: MGYG000002825_15_95
Type: STP
Location: 106013 - 107581 (-)
Type: STP
Location: 106013 - 107581 (-)
Gene ID: MGYG000002825_15_96
Type: CAZyme
Location: 107955 - 109619 (-)
Type: CAZyme
Location: 107955 - 109619 (-)
Gene ID: MGYG000002825_15_97
Type: sulfatase
Location: 109634 - 111106 (-)
Type: sulfatase
Location: 109634 - 111106 (-)
Gene ID: MGYG000002825_15_98
Type: STP
Location: 111117 - 111710 (-)
Type: STP
Location: 111117 - 111710 (-)
Gene ID: MGYG000002825_15_99
Type: TC
Location: 111839 - 113872 (+)
Type: TC
Location: 111839 - 113872 (+)
Gene ID: MGYG000002825_15_100
Type: TC
Location: 114096 - 114248 (+)
Type: TC
Location: 114096 - 114248 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella indica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002825_15_98 | vegan > omnivore | 1.01680 | 0.03162 |