Cluster: MGYG000002825_CGC42
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002825
- CGC Family ID: CGCFAM_03841
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002825_12 | MGYG000002825_12_113 | 122663 | 123439 | - | 3.A.1.11.9 |
| pfam | MGYG000002825_12 | MGYG000002825_12_114 | 123436 | 124251 | - | BPD_transp_1 |
| pfam | MGYG000002825_12 | MGYG000002825_12_115 | 124276 | 125334 | - | NMT1 |
| CAZyme | MGYG000002825_12 | MGYG000002825_12_116 | 126140 | 128317 | + | AA2 |
| NULL(UNKNOWN) | MGYG000002825_12 | MGYG000002825_12_117 | 128461 | 128553 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002825_12 | MGYG000002825_12_118 | 128572 | 131304 | - | 3.A.3.4.1 |
| TC | MGYG000002825_12 | MGYG000002825_12_119 | 131461 | 132138 | - | 9.B.20.1.1 |
| TC | MGYG000002825_12 | MGYG000002825_12_120 | 132890 | 134299 | + | 2.A.1.1.115 |
| TF | MGYG000002825_12 | MGYG000002825_12_121 | 134422 | 135312 | - | HTH_1 |
| TF | MGYG000002825_12 | MGYG000002825_12_122 | 135324 | 135518 | - | HTH_1 |
| TC | MGYG000002825_12 | MGYG000002825_12_123 | 135735 | 138035 | - | 3.D.1.9.2 |
Gene ID: MGYG000002825_12_113
Type: TC
Location: 122663 - 123439 (-)
Type: TC
Location: 122663 - 123439 (-)
Gene ID: MGYG000002825_12_114
Type: pfam
Location: 123436 - 124251 (-)
Type: pfam
Location: 123436 - 124251 (-)
Gene ID: MGYG000002825_12_115
Type: pfam
Location: 124276 - 125334 (-)
Type: pfam
Location: 124276 - 125334 (-)
Gene ID: MGYG000002825_12_116
Type: CAZyme
Location: 126140 - 128317 (+)
Type: CAZyme
Location: 126140 - 128317 (+)
Gene ID: MGYG000002825_12_117
Type:
Location: 128461 - 128553 (-)
Type:
Location: 128461 - 128553 (-)
Gene ID: MGYG000002825_12_118
Type: TC
Location: 128572 - 131304 (-)
Type: TC
Location: 128572 - 131304 (-)
Gene ID: MGYG000002825_12_119
Type: TC
Location: 131461 - 132138 (-)
Type: TC
Location: 131461 - 132138 (-)
Gene ID: MGYG000002825_12_120
Type: TC
Location: 132890 - 134299 (+)
Type: TC
Location: 132890 - 134299 (+)
Gene ID: MGYG000002825_12_121
Type: TF
Location: 134422 - 135312 (-)
Type: TF
Location: 134422 - 135312 (-)
Gene ID: MGYG000002825_12_122
Type: TF
Location: 135324 - 135518 (-)
Type: TF
Location: 135324 - 135518 (-)
Gene ID: MGYG000002825_12_123
Type: TC
Location: 135735 - 138035 (-)
Type: TC
Location: 135735 - 138035 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella indica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.