Cluster: MGYG000002825_CGC35
🧬 Cluster Details
- Gene Count: 25
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002825
- CGC Family ID: CGCFAM_06072
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002825_10 | MGYG000002825_10_76 | 92718 | 93899 | - | 2.A.1.20.2 |
| TC | MGYG000002825_10 | MGYG000002825_10_77 | 94230 | 95360 | + | 4.A.2.1.1 |
| STP | MGYG000002825_10 | MGYG000002825_10_78 | 95362 | 96300 | + | PfkB |
| TC | MGYG000002825_10 | MGYG000002825_10_79 | 96317 | 98005 | + | 4.A.2.1.1 |
| pfam | MGYG000002825_10 | MGYG000002825_10_80 | 98372 | 99229 | - | AP_endonuc_2 |
| TC | MGYG000002825_10 | MGYG000002825_10_81 | 99326 | 100375 | - | 2.A.98.1.3 |
| TF | MGYG000002825_10 | MGYG000002825_10_82 | 100732 | 101598 | + | HTH_1 |
| TC | MGYG000002825_10 | MGYG000002825_10_83 | 101760 | 103229 | + | 2.A.3.1.2 |
| TC | MGYG000002825_10 | MGYG000002825_10_84 | 103382 | 105337 | - | 1.B.14.1.4 |
| peptidase | MGYG000002825_10 | MGYG000002825_10_85 | 105790 | 106626 | - | S09.A39 |
| pfam | MGYG000002825_10 | MGYG000002825_10_86 | 106993 | 107661 | + | GTP_cyclohydroI |
| TC | MGYG000002825_10 | MGYG000002825_10_87 | 107678 | 108835 | + | 9.B.169.1.2 |
| TF | MGYG000002825_10 | MGYG000002825_10_88 | 108991 | 110016 | + | LacI |
| TC | MGYG000002825_10 | MGYG000002825_10_89 | 110299 | 111297 | + | 3.A.1.2.3 |
| TC | MGYG000002825_10 | MGYG000002825_10_90 | 111415 | 112935 | + | 3.A.1.2.3 |
| TC | MGYG000002825_10 | MGYG000002825_10_91 | 112951 | 113961 | + | 3.A.1.2.3 |
| TC | MGYG000002825_10 | MGYG000002825_10_92 | 114023 | 114739 | - | 9.B.114.1.1 |
| pfam | MGYG000002825_10 | MGYG000002825_10_93 | 114864 | 115748 | - | dCMP_cyt_deam_1 | dCMP_cyt_deam_2 |
| TC | MGYG000002825_10 | MGYG000002825_10_94 | 115876 | 116571 | - | 2.A.122.1.1 |
| TC | MGYG000002825_10 | MGYG000002825_10_95 | 116568 | 116966 | - | 1.E.14.1.4 |
| pfam | MGYG000002825_10 | MGYG000002825_10_96 | 117375 | 118322 | + | Dus |
| pfam | MGYG000002825_10 | MGYG000002825_10_97 | 118465 | 119298 | + | PRD | PRD | CAT_RBD |
| TC | MGYG000002825_10 | MGYG000002825_10_98 | 119458 | 121317 | + | 4.A.1.2.2 |
| CAZyme | MGYG000002825_10 | MGYG000002825_10_99 | 121334 | 122728 | + | GH1 |
| TC | MGYG000002825_10 | MGYG000002825_10_100 | 122819 | 123388 | - | 9.B.27.2.7 |
Gene ID: MGYG000002825_10_76
Type: TC
Location: 92718 - 93899 (-)
Type: TC
Location: 92718 - 93899 (-)
Gene ID: MGYG000002825_10_77
Type: TC
Location: 94230 - 95360 (+)
Type: TC
Location: 94230 - 95360 (+)
Gene ID: MGYG000002825_10_78
Type: STP
Location: 95362 - 96300 (+)
Type: STP
Location: 95362 - 96300 (+)
Gene ID: MGYG000002825_10_79
Type: TC
Location: 96317 - 98005 (+)
Type: TC
Location: 96317 - 98005 (+)
Gene ID: MGYG000002825_10_80
Type: pfam
Location: 98372 - 99229 (-)
Type: pfam
Location: 98372 - 99229 (-)
Gene ID: MGYG000002825_10_81
Type: TC
Location: 99326 - 100375 (-)
Type: TC
Location: 99326 - 100375 (-)
Gene ID: MGYG000002825_10_82
Type: TF
Location: 100732 - 101598 (+)
Type: TF
Location: 100732 - 101598 (+)
Gene ID: MGYG000002825_10_83
Type: TC
Location: 101760 - 103229 (+)
Type: TC
Location: 101760 - 103229 (+)
Gene ID: MGYG000002825_10_84
Type: TC
Location: 103382 - 105337 (-)
Type: TC
Location: 103382 - 105337 (-)
Gene ID: MGYG000002825_10_85
Type: peptidase
Location: 105790 - 106626 (-)
Type: peptidase
Location: 105790 - 106626 (-)
Gene ID: MGYG000002825_10_86
Type: pfam
Location: 106993 - 107661 (+)
Type: pfam
Location: 106993 - 107661 (+)
Gene ID: MGYG000002825_10_87
Type: TC
Location: 107678 - 108835 (+)
Type: TC
Location: 107678 - 108835 (+)
Gene ID: MGYG000002825_10_88
Type: TF
Location: 108991 - 110016 (+)
Type: TF
Location: 108991 - 110016 (+)
Gene ID: MGYG000002825_10_89
Type: TC
Location: 110299 - 111297 (+)
Type: TC
Location: 110299 - 111297 (+)
Gene ID: MGYG000002825_10_90
Type: TC
Location: 111415 - 112935 (+)
Type: TC
Location: 111415 - 112935 (+)
Gene ID: MGYG000002825_10_91
Type: TC
Location: 112951 - 113961 (+)
Type: TC
Location: 112951 - 113961 (+)
Gene ID: MGYG000002825_10_92
Type: TC
Location: 114023 - 114739 (-)
Type: TC
Location: 114023 - 114739 (-)
Gene ID: MGYG000002825_10_93
Type: pfam
Location: 114864 - 115748 (-)
Type: pfam
Location: 114864 - 115748 (-)
Gene ID: MGYG000002825_10_94
Type: TC
Location: 115876 - 116571 (-)
Type: TC
Location: 115876 - 116571 (-)
Gene ID: MGYG000002825_10_95
Type: TC
Location: 116568 - 116966 (-)
Type: TC
Location: 116568 - 116966 (-)
Gene ID: MGYG000002825_10_96
Type: pfam
Location: 117375 - 118322 (+)
Type: pfam
Location: 117375 - 118322 (+)
Gene ID: MGYG000002825_10_97
Type: pfam
Location: 118465 - 119298 (+)
Type: pfam
Location: 118465 - 119298 (+)
Gene ID: MGYG000002825_10_98
Type: TC
Location: 119458 - 121317 (+)
Type: TC
Location: 119458 - 121317 (+)
Gene ID: MGYG000002825_10_99
Type: CAZyme
Location: 121334 - 122728 (+)
Type: CAZyme
Location: 121334 - 122728 (+)
Gene ID: MGYG000002825_10_100
Type: TC
Location: 122819 - 123388 (-)
Type: TC
Location: 122819 - 123388 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella indica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.