Cluster: MGYG000002825_CGC1
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002825
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002825_1 | MGYG000002825_1_42 | 49510 | 50235 | + | GT51 |
| TC | MGYG000002825_1 | MGYG000002825_1_43 | 50295 | 50567 | - | 8.A.8.1.5 |
| pfam | MGYG000002825_1 | MGYG000002825_1_44 | 50564 | 51418 | - | RapZ-like_N | PapZ_C |
| TC | MGYG000002825_1 | MGYG000002825_1_45 | 51464 | 51952 | - | 4.A.2.1.4 |
| pfam | MGYG000002825_1 | MGYG000002825_1_46 | 52019 | 52306 | - | Ribosomal_S30AE |
| pfam | MGYG000002825_1 | MGYG000002825_1_47 | 52329 | 53762 | - | Sigma54_AID | Sigma54_DBD | Sigma54_CBD |
| TC | MGYG000002825_1 | MGYG000002825_1_48 | 53810 | 54535 | - | 1.B.42.1.2 |
| TC | MGYG000002825_1 | MGYG000002825_1_49 | 54542 | 55087 | - | 1.B.42.1.2 |
| TC | MGYG000002825_1 | MGYG000002825_1_50 | 55056 | 55631 | - | 1.B.42.1.2 |
| pfam | MGYG000002825_1 | MGYG000002825_1_51 | 55628 | 56194 | - | Hydrolase_3 |
| STP | MGYG000002825_1 | MGYG000002825_1_52 | 56209 | 57213 | - | CBS | CBS | SIS |
| TC | MGYG000002825_1 | MGYG000002825_1_53 | 57210 | 58187 | - | 2.A.19.5.1 |
| TC | MGYG000002825_1 | MGYG000002825_1_54 | 58506 | 59318 | + | 3.A.1.27.3 |
| TC | MGYG000002825_1 | MGYG000002825_1_55 | 59326 | 60108 | + | 3.A.1.27.3 |
| TC | MGYG000002825_1 | MGYG000002825_1_56 | 60113 | 60664 | + | 3.A.1.27.3 |
| TC | MGYG000002825_1 | MGYG000002825_1_57 | 60683 | 61318 | + | 3.A.1.27.3 |
| TC | MGYG000002825_1 | MGYG000002825_1_58 | 61318 | 61608 | + | 3.A.1.27.3 |
Gene ID: MGYG000002825_1_42
Type: CAZyme
Location: 49510 - 50235 (+)
Type: CAZyme
Location: 49510 - 50235 (+)
Gene ID: MGYG000002825_1_43
Type: TC
Location: 50295 - 50567 (-)
Type: TC
Location: 50295 - 50567 (-)
Gene ID: MGYG000002825_1_44
Type: pfam
Location: 50564 - 51418 (-)
Type: pfam
Location: 50564 - 51418 (-)
Gene ID: MGYG000002825_1_45
Type: TC
Location: 51464 - 51952 (-)
Type: TC
Location: 51464 - 51952 (-)
Gene ID: MGYG000002825_1_46
Type: pfam
Location: 52019 - 52306 (-)
Type: pfam
Location: 52019 - 52306 (-)
Gene ID: MGYG000002825_1_47
Type: pfam
Location: 52329 - 53762 (-)
Type: pfam
Location: 52329 - 53762 (-)
Gene ID: MGYG000002825_1_48
Type: TC
Location: 53810 - 54535 (-)
Type: TC
Location: 53810 - 54535 (-)
Gene ID: MGYG000002825_1_49
Type: TC
Location: 54542 - 55087 (-)
Type: TC
Location: 54542 - 55087 (-)
Gene ID: MGYG000002825_1_50
Type: TC
Location: 55056 - 55631 (-)
Type: TC
Location: 55056 - 55631 (-)
Gene ID: MGYG000002825_1_51
Type: pfam
Location: 55628 - 56194 (-)
Type: pfam
Location: 55628 - 56194 (-)
Gene ID: MGYG000002825_1_52
Type: STP
Location: 56209 - 57213 (-)
Type: STP
Location: 56209 - 57213 (-)
Gene ID: MGYG000002825_1_53
Type: TC
Location: 57210 - 58187 (-)
Type: TC
Location: 57210 - 58187 (-)
Gene ID: MGYG000002825_1_54
Type: TC
Location: 58506 - 59318 (+)
Type: TC
Location: 58506 - 59318 (+)
Gene ID: MGYG000002825_1_55
Type: TC
Location: 59326 - 60108 (+)
Type: TC
Location: 59326 - 60108 (+)
Gene ID: MGYG000002825_1_56
Type: TC
Location: 60113 - 60664 (+)
Type: TC
Location: 60113 - 60664 (+)
Gene ID: MGYG000002825_1_57
Type: TC
Location: 60683 - 61318 (+)
Type: TC
Location: 60683 - 61318 (+)
Gene ID: MGYG000002825_1_58
Type: TC
Location: 61318 - 61608 (+)
Type: TC
Location: 61318 - 61608 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella indica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.