Cluster: MGYG000002824_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002824
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002824_26 | MGYG000002824_26_6 | 4632 | 6095 | + | 2.A.3.2.3 |
| NULL(UNKNOWN) | MGYG000002824_26 | MGYG000002824_26_7 | 6558 | 6878 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002824_26 | MGYG000002824_26_8 | 7000 | 9360 | + | 9.A.8.1.6 |
| TC | MGYG000002824_26 | MGYG000002824_26_9 | 9484 | 10680 | + | 2.A.1.2.18 |
| CAZyme | MGYG000002824_26 | MGYG000002824_26_10 | 10834 | 12210 | + | GH13_20 |
Gene ID: MGYG000002824_26_6
Type: TC
Location: 4632 - 6095 (+)
Type: TC
Location: 4632 - 6095 (+)
Gene ID: MGYG000002824_26_7
Type:
Location: 6558 - 6878 (+)
Type:
Location: 6558 - 6878 (+)
Gene ID: MGYG000002824_26_8
Type: TC
Location: 7000 - 9360 (+)
Type: TC
Location: 7000 - 9360 (+)
Gene ID: MGYG000002824_26_9
Type: TC
Location: 9484 - 10680 (+)
Type: TC
Location: 9484 - 10680 (+)
Gene ID: MGYG000002824_26_10
Type: CAZyme
Location: 10834 - 12210 (+)
Type: CAZyme
Location: 10834 - 12210 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900552705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002824_26_6 | vegan > omnivore | 1.80475 | 0.00364 |