Cluster: MGYG000002824_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002824
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002824_64 | MGYG000002824_64_1 | 3 | 656 | - | 9.A.8.1.1 |
| TC | MGYG000002824_64 | MGYG000002824_64_2 | 780 | 1001 | - | 9.A.8.1.6 |
| STP | MGYG000002824_64 | MGYG000002824_64_3 | 1040 | 1282 | - | FeoA |
| STP | MGYG000002824_64 | MGYG000002824_64_4 | 1471 | 1719 | - | PTS-HPr |
| TC | MGYG000002824_64 | MGYG000002824_64_5 | 2141 | 3604 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | MGYG000002824_64 | MGYG000002824_64_6 | 3758 | 4213 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002824_64 | MGYG000002824_64_7 | 4217 | 7225 | - | GH2 |
Gene ID: MGYG000002824_64_1
Type: TC
Location: 3 - 656 (-)
Type: TC
Location: 3 - 656 (-)
Gene ID: MGYG000002824_64_2
Type: TC
Location: 780 - 1001 (-)
Type: TC
Location: 780 - 1001 (-)
Gene ID: MGYG000002824_64_3
Type: STP
Location: 1040 - 1282 (-)
Type: STP
Location: 1040 - 1282 (-)
Gene ID: MGYG000002824_64_4
Type: STP
Location: 1471 - 1719 (-)
Type: STP
Location: 1471 - 1719 (-)
Gene ID: MGYG000002824_64_5
Type: TC
Location: 2141 - 3604 (-)
Type: TC
Location: 2141 - 3604 (-)
Gene ID: MGYG000002824_64_6
Type:
Location: 3758 - 4213 (-)
Type:
Location: 3758 - 4213 (-)
Gene ID: MGYG000002824_64_7
Type: CAZyme
Location: 4217 - 7225 (-)
Type: CAZyme
Location: 4217 - 7225 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900552705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.