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Cluster: MGYG000002817_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002817_27 MGYG000002817_27_2 1543 3231 - GH13_29
TC MGYG000002817_27 MGYG000002817_27_3 3300 4727 - 4.A.1.2.8
TF MGYG000002817_27 MGYG000002817_27_4 5058 7385 - HTH_AraC
NULL(UNKNOWN) MGYG000002817_27 MGYG000002817_27_5 7382 7660 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000002817_27 MGYG000002817_27_6 7684 9288 - 3.A.1.1.10
TC MGYG000002817_27 MGYG000002817_27_7 9320 10198 - 3.A.1.1.10
TC MGYG000002817_27 MGYG000002817_27_8 10218 11114 - 3.A.1.1.10
TC MGYG000002817_27 MGYG000002817_27_9 11407 12612 + 2.A.1.2.25
pfam MGYG000002817_27 MGYG000002817_27_10 12887 14158 + Lip_C
TC MGYG000002817_27 MGYG000002817_27_11 14242 15741 - 2.A.11.1.2
Gene ID: MGYG000002817_27_2
Type: CAZyme
Location: 1543 - 3231 (-)
Gene ID: MGYG000002817_27_3
Type: TC
Location: 3300 - 4727 (-)
Gene ID: MGYG000002817_27_4
Type: TF
Location: 5058 - 7385 (-)
Gene ID: MGYG000002817_27_5
Type:
Location: 7382 - 7660 (-)
Gene ID: MGYG000002817_27_6
Type: TC
Location: 7684 - 9288 (-)
Gene ID: MGYG000002817_27_7
Type: TC
Location: 9320 - 10198 (-)
Gene ID: MGYG000002817_27_8
Type: TC
Location: 10218 - 11114 (-)
Gene ID: MGYG000002817_27_9
Type: TC
Location: 11407 - 12612 (+)
Gene ID: MGYG000002817_27_10
Type: pfam
Location: 12887 - 14158 (+)
Gene ID: MGYG000002817_27_11
Type: TC
Location: 14242 - 15741 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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