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Cluster: MGYG000002817_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002817_23 MGYG000002817_23_27 35107 36729 - GH3
TF MGYG000002817_23 MGYG000002817_23_28 36785 38383 - HTH_AraC | HTH_AraC
TC MGYG000002817_23 MGYG000002817_23_29 38380 40263 - 8.A.59.2.1
STP MGYG000002817_23 MGYG000002817_23_30 40267 41610 - SBP_bac_1
NULL(UNKNOWN) MGYG000002817_23 MGYG000002817_23_31 41753 42418 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000002817_23 MGYG000002817_23_32 43211 44893 - 3.A.1.1.10
TC MGYG000002817_23 MGYG000002817_23_33 45009 45899 - 3.A.1.1.10
TC MGYG000002817_23 MGYG000002817_23_34 45917 46894 - 3.A.1.1.10
Gene ID: MGYG000002817_23_27
Type: CAZyme
Location: 35107 - 36729 (-)
Gene ID: MGYG000002817_23_28
Type: TF
Location: 36785 - 38383 (-)
Gene ID: MGYG000002817_23_29
Type: TC
Location: 38380 - 40263 (-)
Gene ID: MGYG000002817_23_30
Type: STP
Location: 40267 - 41610 (-)
Gene ID: MGYG000002817_23_31
Type:
Location: 41753 - 42418 (-)
Gene ID: MGYG000002817_23_32
Type: TC
Location: 43211 - 44893 (-)
Gene ID: MGYG000002817_23_33
Type: TC
Location: 45009 - 45899 (-)
Gene ID: MGYG000002817_23_34
Type: TC
Location: 45917 - 46894 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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