Cluster: MGYG000002815_CGC12
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000002815
- CGC Family ID: CGCFAM_01458
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002815_5 | MGYG000002815_5_119 | 112010 | 113272 | - | 2.A.103.1.7 |
| STP | MGYG000002815_5 | MGYG000002815_5_120 | 113265 | 113768 | - | FHA |
| pfam | MGYG000002815_5 | MGYG000002815_5_121 | 113872 | 115566 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | MGYG000002815_5 | MGYG000002815_5_122 | 115556 | 117484 | - | GH13_14 |
| CAZyme | MGYG000002815_5 | MGYG000002815_5_123 | 117477 | 119732 | - | GT35 |
| CAZyme | MGYG000002815_5 | MGYG000002815_5_124 | 119713 | 121146 | - | GT5 |
| pfam | MGYG000002815_5 | MGYG000002815_5_125 | 121148 | 122272 | - | Hexapep_GlmU |
| pfam | MGYG000002815_5 | MGYG000002815_5_126 | 122274 | 123407 | - | NTP_transferase | NTP_transf_3 | Hexapep_GlmU |
| TC | MGYG000002815_5 | MGYG000002815_5_127 | 124116 | 125633 | - | 3.A.1.12.8 |
| TC | MGYG000002815_5 | MGYG000002815_5_128 | 125626 | 126366 | - | 3.A.1.12.8 |
Gene ID: MGYG000002815_5_119
Type: TC
Location: 112010 - 113272 (-)
Type: TC
Location: 112010 - 113272 (-)
Gene ID: MGYG000002815_5_120
Type: STP
Location: 113265 - 113768 (-)
Type: STP
Location: 113265 - 113768 (-)
Gene ID: MGYG000002815_5_121
Type: pfam
Location: 113872 - 115566 (-)
Type: pfam
Location: 113872 - 115566 (-)
Gene ID: MGYG000002815_5_122
Type: CAZyme
Location: 115556 - 117484 (-)
Type: CAZyme
Location: 115556 - 117484 (-)
Gene ID: MGYG000002815_5_123
Type: CAZyme
Location: 117477 - 119732 (-)
Type: CAZyme
Location: 117477 - 119732 (-)
Gene ID: MGYG000002815_5_124
Type: CAZyme
Location: 119713 - 121146 (-)
Type: CAZyme
Location: 119713 - 121146 (-)
Gene ID: MGYG000002815_5_125
Type: pfam
Location: 121148 - 122272 (-)
Type: pfam
Location: 121148 - 122272 (-)
Gene ID: MGYG000002815_5_126
Type: pfam
Location: 122274 - 123407 (-)
Type: pfam
Location: 122274 - 123407 (-)
Gene ID: MGYG000002815_5_127
Type: TC
Location: 124116 - 125633 (-)
Type: TC
Location: 124116 - 125633 (-)
Gene ID: MGYG000002815_5_128
Type: TC
Location: 125626 - 126366 (-)
Type: TC
Location: 125626 - 126366 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus vaginimassiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.