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Cluster: MGYG000002815_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002815_1 MGYG000002815_1_13 15331 16578 - GT4
pfam MGYG000002815_1 MGYG000002815_1_14 16587 17786 - GARS_A | ATP-grasp | ATP-grasp_3 | CPSase_L_D2 | Dala_Dala_lig_C | RimK | ATP-grasp_4 | LAL_C2
TC MGYG000002815_1 MGYG000002815_1_15 17798 18391 - 9.B.18.1.3
pfam MGYG000002815_1 MGYG000002815_1_16 18400 19593 - GARS_A | ATP-grasp_3 | CPSase_L_D2 | Dala_Dala_lig_C | ATP-grasp_4 | LAL_C2
pfam MGYG000002815_1 MGYG000002815_1_17 19606 20808 - Aminotran_1_2 | DegT_DnrJ_EryC1 | Cys_Met_Meta_PP
TC MGYG000002815_1 MGYG000002815_1_18 20821 22779 - 9.B.18.2.1
TC MGYG000002815_1 MGYG000002815_1_19 22799 24322 - 2.A.66.4.5
TC MGYG000002815_1 MGYG000002815_1_20 24554 25390 - 8.A.5.1.4
Gene ID: MGYG000002815_1_13
Type: CAZyme
Location: 15331 - 16578 (-)
Gene ID: MGYG000002815_1_14
Type: pfam
Location: 16587 - 17786 (-)
Gene ID: MGYG000002815_1_15
Type: TC
Location: 17798 - 18391 (-)
Gene ID: MGYG000002815_1_16
Type: pfam
Location: 18400 - 19593 (-)
Gene ID: MGYG000002815_1_17
Type: pfam
Location: 19606 - 20808 (-)
Gene ID: MGYG000002815_1_18
Type: TC
Location: 20821 - 22779 (-)
Gene ID: MGYG000002815_1_19
Type: TC
Location: 22799 - 24322 (-)
Gene ID: MGYG000002815_1_20
Type: TC
Location: 24554 - 25390 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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