Cluster: MGYG000002803_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002803
- CGC Family ID: CGCFAM_00340
- Continent: South America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002803_17 | MGYG000002803_17_15 | 18139 | 19614 | - | 2.A.25.1.3 |
| pfam | MGYG000002803_17 | MGYG000002803_17_16 | 19730 | 20545 | + | LpxI_C | LpxI_N |
| CAZyme | MGYG000002803_17 | MGYG000002803_17_17 | 20548 | 21669 | + | GT19 |
| NULL(UNKNOWN) | MGYG000002803_17 | MGYG000002803_17_18 | 21951 | 22511 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000002803_17 | MGYG000002803_17_19 | 22711 | 23430 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002803_17 | MGYG000002803_17_20 | 23500 | 25323 | - | 3.A.1.106.2 |
Gene ID: MGYG000002803_17_15
Type: TC
Location: 18139 - 19614 (-)
Type: TC
Location: 18139 - 19614 (-)
Gene ID: MGYG000002803_17_16
Type: pfam
Location: 19730 - 20545 (+)
Type: pfam
Location: 19730 - 20545 (+)
Gene ID: MGYG000002803_17_17
Type: CAZyme
Location: 20548 - 21669 (+)
Type: CAZyme
Location: 20548 - 21669 (+)
Gene ID: MGYG000002803_17_18
Type:
Location: 21951 - 22511 (-)
Type:
Location: 21951 - 22511 (-)
Gene ID: MGYG000002803_17_19
Type:
Location: 22711 - 23430 (-)
Type:
Location: 22711 - 23430 (-)
Gene ID: MGYG000002803_17_20
Type: TC
Location: 23500 - 25323 (-)
Type: TC
Location: 23500 - 25323 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
CAG-196
Species
CAG-196 sp900549855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.