Cluster: MGYG000002801_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000002801
- CGC Family ID: CGCFAM_00003
- Continent: South America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002801_2 | MGYG000002801_2_3 | 4139 | 5626 | - | 2.A.66.2.16 |
| pfam | MGYG000002801_2 | MGYG000002801_2_4 | 5770 | 6792 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| CAZyme | MGYG000002801_2 | MGYG000002801_2_5 | 8521 | 10866 | - | GT2 |
| CAZyme | MGYG000002801_2 | MGYG000002801_2_6 | 10908 | 11783 | - | GT14 |
| CAZyme | MGYG000002801_2 | MGYG000002801_2_7 | 11841 | 12881 | - | GT2 |
| CAZyme | MGYG000002801_2 | MGYG000002801_2_8 | 12865 | 13668 | - | GT111 |
| TC | MGYG000002801_2 | MGYG000002801_2_9 | 13665 | 14360 | - | 9.B.18.1.2 |
Gene ID: MGYG000002801_2_3
Type: TC
Location: 4139 - 5626 (-)
Type: TC
Location: 4139 - 5626 (-)
Gene ID: MGYG000002801_2_4
Type: pfam
Location: 5770 - 6792 (-)
Type: pfam
Location: 5770 - 6792 (-)
Gene ID: MGYG000002801_2_5
Type: CAZyme
Location: 8521 - 10866 (-)
Type: CAZyme
Location: 8521 - 10866 (-)
Gene ID: MGYG000002801_2_6
Type: CAZyme
Location: 10908 - 11783 (-)
Type: CAZyme
Location: 10908 - 11783 (-)
Gene ID: MGYG000002801_2_7
Type: CAZyme
Location: 11841 - 12881 (-)
Type: CAZyme
Location: 11841 - 12881 (-)
Gene ID: MGYG000002801_2_8
Type: CAZyme
Location: 12865 - 13668 (-)
Type: CAZyme
Location: 12865 - 13668 (-)
Gene ID: MGYG000002801_2_9
Type: TC
Location: 13665 - 14360 (-)
Type: TC
Location: 13665 - 14360 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Parolsenella
Species
Parolsenella sp900549525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.