Cluster: MGYG000002789_CGC22
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 8
- Substrate:
- Genome ID: MGYG000002789
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002789_15 | MGYG000002789_15_1 | 163 | 1122 | - | GH43_26 |
| CAZyme | MGYG000002789_15 | MGYG000002789_15_2 | 1187 | 2332 | - | GH154 |
| CAZyme | MGYG000002789_15 | MGYG000002789_15_3 | 2329 | 3255 | - | GH43_22 |
| CAZyme | MGYG000002789_15 | MGYG000002789_15_4 | 3279 | 5024 | - | GH35 |
| CAZyme | MGYG000002789_15 | MGYG000002789_15_5 | 5083 | 6576 | - | GH51_1 |
| NULL(UNKNOWN) | MGYG000002789_15 | MGYG000002789_15_6 | 6719 | 7396 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002789_15 | MGYG000002789_15_7 | 7411 | 8280 | - | 3.A.1.1.39 |
| TC | MGYG000002789_15 | MGYG000002789_15_8 | 8283 | 9200 | - | 3.A.1.1.11 |
| TC | MGYG000002789_15 | MGYG000002789_15_9 | 9281 | 10555 | - | 3.A.1.1.44 |
| TF | MGYG000002789_15 | MGYG000002789_15_10 | 10888 | 11832 | + | HTH_5 |
| CAZyme | MGYG000002789_15 | MGYG000002789_15_11 | 11850 | 14222 | + | GH2 |
| pfam | MGYG000002789_15 | MGYG000002789_15_12 | 14738 | 15643 | - | DDE_Tnp_ISL3 | Zn_ribbon_ISL3 |
| CAZyme | MGYG000002789_15 | MGYG000002789_15_13 | 15919 | 17049 | - | GH88 |
| CAZyme | MGYG000002789_15 | MGYG000002789_15_14 | 17140 | 18990 | - | GH154 |
Gene ID: MGYG000002789_15_1
Type: CAZyme
Location: 163 - 1122 (-)
Type: CAZyme
Location: 163 - 1122 (-)
Gene ID: MGYG000002789_15_2
Type: CAZyme
Location: 1187 - 2332 (-)
Type: CAZyme
Location: 1187 - 2332 (-)
Gene ID: MGYG000002789_15_3
Type: CAZyme
Location: 2329 - 3255 (-)
Type: CAZyme
Location: 2329 - 3255 (-)
Gene ID: MGYG000002789_15_4
Type: CAZyme
Location: 3279 - 5024 (-)
Type: CAZyme
Location: 3279 - 5024 (-)
Gene ID: MGYG000002789_15_5
Type: CAZyme
Location: 5083 - 6576 (-)
Type: CAZyme
Location: 5083 - 6576 (-)
Gene ID: MGYG000002789_15_6
Type:
Location: 6719 - 7396 (-)
Type:
Location: 6719 - 7396 (-)
Gene ID: MGYG000002789_15_7
Type: TC
Location: 7411 - 8280 (-)
Type: TC
Location: 7411 - 8280 (-)
Gene ID: MGYG000002789_15_8
Type: TC
Location: 8283 - 9200 (-)
Type: TC
Location: 8283 - 9200 (-)
Gene ID: MGYG000002789_15_9
Type: TC
Location: 9281 - 10555 (-)
Type: TC
Location: 9281 - 10555 (-)
Gene ID: MGYG000002789_15_10
Type: TF
Location: 10888 - 11832 (+)
Type: TF
Location: 10888 - 11832 (+)
Gene ID: MGYG000002789_15_11
Type: CAZyme
Location: 11850 - 14222 (+)
Type: CAZyme
Location: 11850 - 14222 (+)
Gene ID: MGYG000002789_15_12
Type: pfam
Location: 14738 - 15643 (-)
Type: pfam
Location: 14738 - 15643 (-)
Gene ID: MGYG000002789_15_13
Type: CAZyme
Location: 15919 - 17049 (-)
Type: CAZyme
Location: 15919 - 17049 (-)
Gene ID: MGYG000002789_15_14
Type: CAZyme
Location: 17140 - 18990 (-)
Type: CAZyme
Location: 17140 - 18990 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lapidilactobacillus
Species
Lapidilactobacillus dextrinicus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.