Cluster: MGYG000002782_CGC4
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002782
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002782_4 | MGYG000002782_4_14 | 12922 | 13419 | - | 2.A.2.2.1 |
| pfam | MGYG000002782_4 | MGYG000002782_4_15 | 13993 | 14550 | + | Acetyltransf_1 | Acetyltransf_7 |
| CAZyme | MGYG000002782_4 | MGYG000002782_4_16 | 14649 | 15761 | + | GT2 |
| TF | MGYG000002782_4 | MGYG000002782_4_17 | 16014 | 16217 | + | CSD |
| STP | MGYG000002782_4 | MGYG000002782_4_18 | 16345 | 17730 | + | HD |
| TC | MGYG000002782_4 | MGYG000002782_4_19 | 18476 | 19207 | + | 3.A.1.3.16 |
| TC | MGYG000002782_4 | MGYG000002782_4_20 | 19312 | 20154 | + | 3.A.1.3.16 |
| TC | MGYG000002782_4 | MGYG000002782_4_21 | 20318 | 21073 | + | 3.A.1.3.16 |
| TC | MGYG000002782_4 | MGYG000002782_4_22 | 21077 | 21724 | + | 3.A.1.3.4 |
| TC | MGYG000002782_4 | MGYG000002782_4_23 | 21806 | 22492 | + | 2.A.115.2.14 |
Gene ID: MGYG000002782_4_14
Type: TC
Location: 12922 - 13419 (-)
Type: TC
Location: 12922 - 13419 (-)
Gene ID: MGYG000002782_4_15
Type: pfam
Location: 13993 - 14550 (+)
Type: pfam
Location: 13993 - 14550 (+)
Gene ID: MGYG000002782_4_16
Type: CAZyme
Location: 14649 - 15761 (+)
Type: CAZyme
Location: 14649 - 15761 (+)
Gene ID: MGYG000002782_4_17
Type: TF
Location: 16014 - 16217 (+)
Type: TF
Location: 16014 - 16217 (+)
Gene ID: MGYG000002782_4_18
Type: STP
Location: 16345 - 17730 (+)
Type: STP
Location: 16345 - 17730 (+)
Gene ID: MGYG000002782_4_19
Type: TC
Location: 18476 - 19207 (+)
Type: TC
Location: 18476 - 19207 (+)
Gene ID: MGYG000002782_4_20
Type: TC
Location: 19312 - 20154 (+)
Type: TC
Location: 19312 - 20154 (+)
Gene ID: MGYG000002782_4_21
Type: TC
Location: 20318 - 21073 (+)
Type: TC
Location: 20318 - 21073 (+)
Gene ID: MGYG000002782_4_22
Type: TC
Location: 21077 - 21724 (+)
Type: TC
Location: 21077 - 21724 (+)
Gene ID: MGYG000002782_4_23
Type: TC
Location: 21806 - 22492 (+)
Type: TC
Location: 21806 - 22492 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.