Cluster: MGYG000002782_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002782
- CGC Family ID: CGCFAM_02187
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002782_3 | MGYG000002782_3_34 | 40387 | 43236 | + | CBM13 | CBM13 | CBM13 | CBM13 | GH25 |
| STP | MGYG000002782_3 | MGYG000002782_3_35 | 43239 | 44204 | + | PALP |
| CAZyme | MGYG000002782_3 | MGYG000002782_3_36 | 44225 | 45151 | + | GT2 |
| NULL(UNKNOWN) | MGYG000002782_3 | MGYG000002782_3_37 | 45151 | 45507 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002782_3 | MGYG000002782_3_38 | 45507 | 45860 | + | 2.A.7.33.5 |
Gene ID: MGYG000002782_3_34
Type: CAZyme
Location: 40387 - 43236 (+)
Type: CAZyme
Location: 40387 - 43236 (+)
Gene ID: MGYG000002782_3_35
Type: STP
Location: 43239 - 44204 (+)
Type: STP
Location: 43239 - 44204 (+)
Gene ID: MGYG000002782_3_36
Type: CAZyme
Location: 44225 - 45151 (+)
Type: CAZyme
Location: 44225 - 45151 (+)
Gene ID: MGYG000002782_3_37
Type:
Location: 45151 - 45507 (+)
Type:
Location: 45151 - 45507 (+)
Gene ID: MGYG000002782_3_38
Type: TC
Location: 45507 - 45860 (+)
Type: TC
Location: 45507 - 45860 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.