Cluster: MGYG000002782_CGC2
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate: alpha-glucan
- Genome ID: MGYG000002782
- CGC Family ID: CGCFAM_00004
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002782_2 | MGYG000002782_2_79 | 103327 | 105516 | + | CBM48 | GH13_9 |
| CAZyme | MGYG000002782_2 | MGYG000002782_2_80 | 105627 | 108071 | + | GT35 |
| pfam | MGYG000002782_2 | MGYG000002782_2_81 | 108136 | 109284 | + | NTP_transferase | Hexapep_GlmU |
| pfam | MGYG000002782_2 | MGYG000002782_2_82 | 109287 | 110381 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | MGYG000002782_2 | MGYG000002782_2_83 | 110406 | 111905 | + | GT5 |
| CAZyme | MGYG000002782_2 | MGYG000002782_2_84 | 111910 | 115179 | + | GH13_39 | GH77 |
| pfam | MGYG000002782_2 | MGYG000002782_2_85 | 115297 | 116058 | - | YdjC |
| TC | MGYG000002782_2 | MGYG000002782_2_86 | 116082 | 117581 | - | 4.A.1.2.11 |
Gene ID: MGYG000002782_2_79
Type: CAZyme
Location: 103327 - 105516 (+)
Type: CAZyme
Location: 103327 - 105516 (+)
Gene ID: MGYG000002782_2_80
Type: CAZyme
Location: 105627 - 108071 (+)
Type: CAZyme
Location: 105627 - 108071 (+)
Gene ID: MGYG000002782_2_81
Type: pfam
Location: 108136 - 109284 (+)
Type: pfam
Location: 108136 - 109284 (+)
Gene ID: MGYG000002782_2_82
Type: pfam
Location: 109287 - 110381 (+)
Type: pfam
Location: 109287 - 110381 (+)
Gene ID: MGYG000002782_2_83
Type: CAZyme
Location: 110406 - 111905 (+)
Type: CAZyme
Location: 110406 - 111905 (+)
Gene ID: MGYG000002782_2_84
Type: CAZyme
Location: 111910 - 115179 (+)
Type: CAZyme
Location: 111910 - 115179 (+)
Gene ID: MGYG000002782_2_85
Type: pfam
Location: 115297 - 116058 (-)
Type: pfam
Location: 115297 - 116058 (-)
Gene ID: MGYG000002782_2_86
Type: TC
Location: 116082 - 117581 (-)
Type: TC
Location: 116082 - 117581 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.