Cluster: MGYG000002775_CGC10
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000002775
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002775_8 | MGYG000002775_8_45 | 55072 | 56121 | - | GT2 |
| CAZyme | MGYG000002775_8 | MGYG000002775_8_46 | 56150 | 57004 | - | GT8 |
| CAZyme | MGYG000002775_8 | MGYG000002775_8_47 | 57006 | 57803 | - | GT32 |
| pfam | MGYG000002775_8 | MGYG000002775_8_48 | 57835 | 58929 | - | EpsG |
| CAZyme | MGYG000002775_8 | MGYG000002775_8_49 | 58982 | 60127 | - | GT4 |
| CAZyme | MGYG000002775_8 | MGYG000002775_8_50 | 60200 | 61219 | - | GT2 |
| CAZyme | MGYG000002775_8 | MGYG000002775_8_51 | 61212 | 62111 | - | GT2 |
| TC | MGYG000002775_8 | MGYG000002775_8_52 | 62108 | 62911 | - | 9.B.18.1.2 |
Gene ID: MGYG000002775_8_45
Type: CAZyme
Location: 55072 - 56121 (-)
Type: CAZyme
Location: 55072 - 56121 (-)
Gene ID: MGYG000002775_8_46
Type: CAZyme
Location: 56150 - 57004 (-)
Type: CAZyme
Location: 56150 - 57004 (-)
Gene ID: MGYG000002775_8_47
Type: CAZyme
Location: 57006 - 57803 (-)
Type: CAZyme
Location: 57006 - 57803 (-)
Gene ID: MGYG000002775_8_48
Type: pfam
Location: 57835 - 58929 (-)
Type: pfam
Location: 57835 - 58929 (-)
Gene ID: MGYG000002775_8_49
Type: CAZyme
Location: 58982 - 60127 (-)
Type: CAZyme
Location: 58982 - 60127 (-)
Gene ID: MGYG000002775_8_50
Type: CAZyme
Location: 60200 - 61219 (-)
Type: CAZyme
Location: 60200 - 61219 (-)
Gene ID: MGYG000002775_8_51
Type: CAZyme
Location: 61212 - 62111 (-)
Type: CAZyme
Location: 61212 - 62111 (-)
Gene ID: MGYG000002775_8_52
Type: TC
Location: 62108 - 62911 (-)
Type: TC
Location: 62108 - 62911 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900540935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.