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Cluster: MGYG000002764_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002764_2 MGYG000002764_2_11 11061 11399 - 4.A.3.1.2
TF MGYG000002764_2 MGYG000002764_2_12 11614 12618 - LacI
TC MGYG000002764_2 MGYG000002764_2_13 12976 14751 + 4.A.3.1.1
CAZyme MGYG000002764_2 MGYG000002764_2_14 14818 16257 + GH1
TF MGYG000002764_2 MGYG000002764_2_15 16534 17571 - LacI
CAZyme MGYG000002764_2 MGYG000002764_2_16 17913 19355 + GH1
TC MGYG000002764_2 MGYG000002764_2_17 19532 21292 + 4.A.3.1.1
TF MGYG000002764_2 MGYG000002764_2_18 21466 22476 - LacI
TC MGYG000002764_2 MGYG000002764_2_19 22752 24530 + 4.A.3.1.1
CAZyme MGYG000002764_2 MGYG000002764_2_20 24607 26028 + GH1
Gene ID: MGYG000002764_2_11
Type: TC
Location: 11061 - 11399 (-)
Gene ID: MGYG000002764_2_12
Type: TF
Location: 11614 - 12618 (-)
Gene ID: MGYG000002764_2_13
Type: TC
Location: 12976 - 14751 (+)
Gene ID: MGYG000002764_2_14
Type: CAZyme
Location: 14818 - 16257 (+)
Gene ID: MGYG000002764_2_15
Type: TF
Location: 16534 - 17571 (-)
Gene ID: MGYG000002764_2_16
Type: CAZyme
Location: 17913 - 19355 (+)
Gene ID: MGYG000002764_2_17
Type: TC
Location: 19532 - 21292 (+)
Gene ID: MGYG000002764_2_18
Type: TF
Location: 21466 - 22476 (-)
Gene ID: MGYG000002764_2_19
Type: TC
Location: 22752 - 24530 (+)
Gene ID: MGYG000002764_2_20
Type: CAZyme
Location: 24607 - 26028 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002764_2_15 vegetarian > omnivore 1.07749 0.01867

🧭 Explore Read Mapping of CGC

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