dbCAN HGM

Cluster: MGYG000002763_CGC11

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	MGYG000002763_13	MGYG000002763_13_18	20746	21765	-	GT2
CAZyme	MGYG000002763_13	MGYG000002763_13_19	22022	23125	+	GT2
CAZyme	MGYG000002763_13	MGYG000002763_13_20	23132	24172	+	GT2
CAZyme	MGYG000002763_13	MGYG000002763_13_21	24247	25365	+	GT2
CAZyme	MGYG000002763_13	MGYG000002763_13_22	25378	26445	+	GT2
pfam	MGYG000002763_13	MGYG000002763_13_23	26705	28195	+	Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_2 \| Choline_bind_3 \| Choline_bind_3 \| Choline_bind_3 \| Choline_bind_3 \| Choline_bind_3
pfam	MGYG000002763_13	MGYG000002763_13_24	28276	30486	+	Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_3 \| Choline_bind_3
CAZyme	MGYG000002763_13	MGYG000002763_13_25	30749	32482	+	GH25
pfam	MGYG000002763_13	MGYG000002763_13_26	32583	34724	+	Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Peptidase_C39_2 \| Choline_bind_3 \| Choline_bind_3 \| Choline_bind_3 \| Choline_bind_3
TC	MGYG000002763_13	MGYG000002763_13_27	34786	35727	-	2.A.7.18.1

Gene ID: MGYG000002763_13_18
Type: CAZyme
Location: 20746 - 21765 (-)

Gene ID: MGYG000002763_13_19
Type: CAZyme
Location: 22022 - 23125 (+)

Gene ID: MGYG000002763_13_20
Type: CAZyme
Location: 23132 - 24172 (+)

Gene ID: MGYG000002763_13_21
Type: CAZyme
Location: 24247 - 25365 (+)

Gene ID: MGYG000002763_13_22
Type: CAZyme
Location: 25378 - 26445 (+)

Gene ID: MGYG000002763_13_23
Type: pfam
Location: 26705 - 28195 (+)

Gene ID: MGYG000002763_13_24
Type: pfam
Location: 28276 - 30486 (+)

Gene ID: MGYG000002763_13_25
Type: CAZyme
Location: 30749 - 32482 (+)

Gene ID: MGYG000002763_13_26
Type: pfam
Location: 32583 - 34724 (+)

Gene ID: MGYG000002763_13_27
Type: TC
Location: 34786 - 35727 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.