Cluster: MGYG000002763_CGC1
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002763
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002763_1 | MGYG000002763_1_41 | 38899 | 40275 | - | GH13_20 |
| TC | MGYG000002763_1 | MGYG000002763_1_42 | 40429 | 41625 | - | 2.A.1.2.18 |
| TC | MGYG000002763_1 | MGYG000002763_1_43 | 41746 | 44106 | - | 9.A.8.1.6 |
| peptidase | MGYG000002763_1 | MGYG000002763_1_44 | 44579 | 45478 | - | S09.UPW |
| TC | MGYG000002763_1 | MGYG000002763_1_45 | 45722 | 46285 | + | 4.A.1.2.6 |
| pfam | MGYG000002763_1 | MGYG000002763_1_46 | 46467 | 47870 | + | tRNA-synt_2 | tRNA_anti-codon |
| NULL(UNKNOWN) | MGYG000002763_1 | MGYG000002763_1_47 | 48129 | 48917 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002763_1 | MGYG000002763_1_48 | 49079 | 50059 | + | 3.A.1.34.1 |
| TC | MGYG000002763_1 | MGYG000002763_1_49 | 50263 | 51186 | + | 3.A.1.34.1 |
| TC | MGYG000002763_1 | MGYG000002763_1_50 | 51179 | 51973 | + | 3.A.1.34.1 |
Gene ID: MGYG000002763_1_41
Type: CAZyme
Location: 38899 - 40275 (-)
Type: CAZyme
Location: 38899 - 40275 (-)
Gene ID: MGYG000002763_1_42
Type: TC
Location: 40429 - 41625 (-)
Type: TC
Location: 40429 - 41625 (-)
Gene ID: MGYG000002763_1_43
Type: TC
Location: 41746 - 44106 (-)
Type: TC
Location: 41746 - 44106 (-)
Gene ID: MGYG000002763_1_44
Type: peptidase
Location: 44579 - 45478 (-)
Type: peptidase
Location: 44579 - 45478 (-)
Gene ID: MGYG000002763_1_45
Type: TC
Location: 45722 - 46285 (+)
Type: TC
Location: 45722 - 46285 (+)
Gene ID: MGYG000002763_1_46
Type: pfam
Location: 46467 - 47870 (+)
Type: pfam
Location: 46467 - 47870 (+)
Gene ID: MGYG000002763_1_47
Type:
Location: 48129 - 48917 (+)
Type:
Location: 48129 - 48917 (+)
Gene ID: MGYG000002763_1_48
Type: TC
Location: 49079 - 50059 (+)
Type: TC
Location: 49079 - 50059 (+)
Gene ID: MGYG000002763_1_49
Type: TC
Location: 50263 - 51186 (+)
Type: TC
Location: 50263 - 51186 (+)
Gene ID: MGYG000002763_1_50
Type: TC
Location: 51179 - 51973 (+)
Type: TC
Location: 51179 - 51973 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp905197585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.