Cluster: MGYG000002760_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002760
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002760_23 | MGYG000002760_23_17 | 24304 | 25710 | + | CE4 |
| STP | MGYG000002760_23 | MGYG000002760_23_18 | 26039 | 27883 | + | CBS | CBS |
| TC | MGYG000002760_23 | MGYG000002760_23_19 | 27892 | 29154 | + | 2.A.55.3.6 |
| TC | MGYG000002760_23 | MGYG000002760_23_20 | 29264 | 31480 | - | 9.B.97.5.1 |
Gene ID: MGYG000002760_23_17
Type: CAZyme
Location: 24304 - 25710 (+)
Type: CAZyme
Location: 24304 - 25710 (+)
Gene ID: MGYG000002760_23_18
Type: STP
Location: 26039 - 27883 (+)
Type: STP
Location: 26039 - 27883 (+)
Gene ID: MGYG000002760_23_19
Type: TC
Location: 27892 - 29154 (+)
Type: TC
Location: 27892 - 29154 (+)
Gene ID: MGYG000002760_23_20
Type: TC
Location: 29264 - 31480 (-)
Type: TC
Location: 29264 - 31480 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AL
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.