Cluster: MGYG000002760_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000002760
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002760_18 | MGYG000002760_18_9 | 12355 | 13914 | + | 2.A.2.5.1 |
| CAZyme | MGYG000002760_18 | MGYG000002760_18_10 | 14030 | 15625 | + | GH28 |
| CAZyme | MGYG000002760_18 | MGYG000002760_18_11 | 15760 | 17949 | + | CE19 | CE8 |
| pfam | MGYG000002760_18 | MGYG000002760_18_12 | 17997 | 18665 | + | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | MGYG000002760_18 | MGYG000002760_18_13 | 18773 | 20011 | + | GH105 |
Gene ID: MGYG000002760_18_9
Type: TC
Location: 12355 - 13914 (+)
Type: TC
Location: 12355 - 13914 (+)
Gene ID: MGYG000002760_18_10
Type: CAZyme
Location: 14030 - 15625 (+)
Type: CAZyme
Location: 14030 - 15625 (+)
Gene ID: MGYG000002760_18_11
Type: CAZyme
Location: 15760 - 17949 (+)
Type: CAZyme
Location: 15760 - 17949 (+)
Gene ID: MGYG000002760_18_12
Type: pfam
Location: 17997 - 18665 (+)
Type: pfam
Location: 17997 - 18665 (+)
Gene ID: MGYG000002760_18_13
Type: CAZyme
Location: 18773 - 20011 (+)
Type: CAZyme
Location: 18773 - 20011 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AL
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.