Cluster: MGYG000002760_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002760
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002760_17 | MGYG000002760_17_10 | 13633 | 15315 | + | 2.A.66.4.4 |
| pfam | MGYG000002760_17 | MGYG000002760_17_11 | 15322 | 17262 | + | GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH |
| TC | MGYG000002760_17 | MGYG000002760_17_12 | 17627 | 19240 | + | 3.A.1.5.27 |
| TC | MGYG000002760_17 | MGYG000002760_17_13 | 19398 | 20354 | + | 3.A.1.5.38 |
| TC | MGYG000002760_17 | MGYG000002760_17_14 | 20358 | 22373 | + | 3.A.1.5.25 |
| TC | MGYG000002760_17 | MGYG000002760_17_15 | 22374 | 23201 | + | 3.A.1.5.27 |
| CAZyme | MGYG000002760_17 | MGYG000002760_17_16 | 23333 | 24259 | + | CE7 |
Gene ID: MGYG000002760_17_10
Type: TC
Location: 13633 - 15315 (+)
Type: TC
Location: 13633 - 15315 (+)
Gene ID: MGYG000002760_17_11
Type: pfam
Location: 15322 - 17262 (+)
Type: pfam
Location: 15322 - 17262 (+)
Gene ID: MGYG000002760_17_12
Type: TC
Location: 17627 - 19240 (+)
Type: TC
Location: 17627 - 19240 (+)
Gene ID: MGYG000002760_17_13
Type: TC
Location: 19398 - 20354 (+)
Type: TC
Location: 19398 - 20354 (+)
Gene ID: MGYG000002760_17_14
Type: TC
Location: 20358 - 22373 (+)
Type: TC
Location: 20358 - 22373 (+)
Gene ID: MGYG000002760_17_15
Type: TC
Location: 22374 - 23201 (+)
Type: TC
Location: 22374 - 23201 (+)
Gene ID: MGYG000002760_17_16
Type: CAZyme
Location: 23333 - 24259 (+)
Type: CAZyme
Location: 23333 - 24259 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AL
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.