Cluster: MGYG000002760_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002760
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002760_16 | MGYG000002760_16_22 | 21285 | 22304 | + | GH109 |
| pfam | MGYG000002760_16 | MGYG000002760_16_23 | 22471 | 23337 | + | AP_endonuc_2 |
| TC | MGYG000002760_16 | MGYG000002760_16_24 | 23485 | 24345 | + | 3.A.1.3.15 |
| TC | MGYG000002760_16 | MGYG000002760_16_25 | 24464 | 25825 | + | 3.A.1.3.16 |
| TC | MGYG000002760_16 | MGYG000002760_16_26 | 25838 | 26590 | + | 3.A.1.3.20 |
Gene ID: MGYG000002760_16_22
Type: CAZyme
Location: 21285 - 22304 (+)
Type: CAZyme
Location: 21285 - 22304 (+)
Gene ID: MGYG000002760_16_23
Type: pfam
Location: 22471 - 23337 (+)
Type: pfam
Location: 22471 - 23337 (+)
Gene ID: MGYG000002760_16_24
Type: TC
Location: 23485 - 24345 (+)
Type: TC
Location: 23485 - 24345 (+)
Gene ID: MGYG000002760_16_25
Type: TC
Location: 24464 - 25825 (+)
Type: TC
Location: 24464 - 25825 (+)
Gene ID: MGYG000002760_16_26
Type: TC
Location: 25838 - 26590 (+)
Type: TC
Location: 25838 - 26590 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AL
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.