Cluster: MGYG000002760_CGC4
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002760
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002760_9 | MGYG000002760_9_11 | 14464 | 16914 | - | 4.A.1.1.8 |
| TF | MGYG000002760_9 | MGYG000002760_9_12 | 17144 | 17863 | + | GntR |
| TC | MGYG000002760_9 | MGYG000002760_9_13 | 18174 | 19490 | + | 3.A.1.1.45 |
| TC | MGYG000002760_9 | MGYG000002760_9_14 | 19578 | 20432 | + | 3.A.1.1.45 |
| TC | MGYG000002760_9 | MGYG000002760_9_15 | 20432 | 21271 | + | 3.A.1.1.45 |
| TC | MGYG000002760_9 | MGYG000002760_9_16 | 21339 | 22538 | + | 3.A.1.1.22 |
| CAZyme | MGYG000002760_9 | MGYG000002760_9_17 | 22991 | 25258 | - | GT35 |
| CAZyme | MGYG000002760_9 | MGYG000002760_9_18 | 25387 | 26892 | - | GH77 |
Gene ID: MGYG000002760_9_11
Type: TC
Location: 14464 - 16914 (-)
Type: TC
Location: 14464 - 16914 (-)
Gene ID: MGYG000002760_9_12
Type: TF
Location: 17144 - 17863 (+)
Type: TF
Location: 17144 - 17863 (+)
Gene ID: MGYG000002760_9_13
Type: TC
Location: 18174 - 19490 (+)
Type: TC
Location: 18174 - 19490 (+)
Gene ID: MGYG000002760_9_14
Type: TC
Location: 19578 - 20432 (+)
Type: TC
Location: 19578 - 20432 (+)
Gene ID: MGYG000002760_9_15
Type: TC
Location: 20432 - 21271 (+)
Type: TC
Location: 20432 - 21271 (+)
Gene ID: MGYG000002760_9_16
Type: TC
Location: 21339 - 22538 (+)
Type: TC
Location: 21339 - 22538 (+)
Gene ID: MGYG000002760_9_17
Type: CAZyme
Location: 22991 - 25258 (-)
Type: CAZyme
Location: 22991 - 25258 (-)
Gene ID: MGYG000002760_9_18
Type: CAZyme
Location: 25387 - 26892 (-)
Type: CAZyme
Location: 25387 - 26892 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AL
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.