Cluster: MGYG000002760_CGC3
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002760
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002760_2 | MGYG000002760_2_41 | 51748 | 52917 | - | CE9 |
| STP | MGYG000002760_2 | MGYG000002760_2_42 | 53035 | 54201 | - | SIS | SIS |
| TF | MGYG000002760_2 | MGYG000002760_2_43 | 54316 | 55047 | - | GntR |
| TC | MGYG000002760_2 | MGYG000002760_2_44 | 55233 | 56315 | - | 4.A.6.1.4 |
| TC | MGYG000002760_2 | MGYG000002760_2_45 | 56305 | 57105 | - | 4.A.6.1.4 |
| TC | MGYG000002760_2 | MGYG000002760_2_46 | 57196 | 57678 | - | 4.A.6.1.4 |
| pfam | MGYG000002760_2 | MGYG000002760_2_47 | 57715 | 57996 | - | YajC |
| TC | MGYG000002760_2 | MGYG000002760_2_48 | 57996 | 58439 | - | 4.A.6.1.16 |
Gene ID: MGYG000002760_2_41
Type: CAZyme
Location: 51748 - 52917 (-)
Type: CAZyme
Location: 51748 - 52917 (-)
Gene ID: MGYG000002760_2_42
Type: STP
Location: 53035 - 54201 (-)
Type: STP
Location: 53035 - 54201 (-)
Gene ID: MGYG000002760_2_43
Type: TF
Location: 54316 - 55047 (-)
Type: TF
Location: 54316 - 55047 (-)
Gene ID: MGYG000002760_2_44
Type: TC
Location: 55233 - 56315 (-)
Type: TC
Location: 55233 - 56315 (-)
Gene ID: MGYG000002760_2_45
Type: TC
Location: 56305 - 57105 (-)
Type: TC
Location: 56305 - 57105 (-)
Gene ID: MGYG000002760_2_46
Type: TC
Location: 57196 - 57678 (-)
Type: TC
Location: 57196 - 57678 (-)
Gene ID: MGYG000002760_2_47
Type: pfam
Location: 57715 - 57996 (-)
Type: pfam
Location: 57715 - 57996 (-)
Gene ID: MGYG000002760_2_48
Type: TC
Location: 57996 - 58439 (-)
Type: TC
Location: 57996 - 58439 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AL
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.