Cluster: MGYG000002760_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002760
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002760_30 | MGYG000002760_30_24 | 20887 | 22002 | - | GT28 |
| TC | MGYG000002760_30 | MGYG000002760_30_25 | 21992 | 23485 | - | 2.A.103.1.1 |
| pfam | MGYG000002760_30 | MGYG000002760_30_26 | 23521 | 24927 | - | Mur_ligase_C | Mur_ligase_M |
| TC | MGYG000002760_30 | MGYG000002760_30_27 | 24937 | 25956 | - | 9.B.146.1.6 |
Gene ID: MGYG000002760_30_24
Type: CAZyme
Location: 20887 - 22002 (-)
Type: CAZyme
Location: 20887 - 22002 (-)
Gene ID: MGYG000002760_30_25
Type: TC
Location: 21992 - 23485 (-)
Type: TC
Location: 21992 - 23485 (-)
Gene ID: MGYG000002760_30_26
Type: pfam
Location: 23521 - 24927 (-)
Type: pfam
Location: 23521 - 24927 (-)
Gene ID: MGYG000002760_30_27
Type: TC
Location: 24937 - 25956 (-)
Type: TC
Location: 24937 - 25956 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AL
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.