Cluster: MGYG000002760_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002760
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002760_1 | MGYG000002760_1_10 | 17156 | 17482 | + | 4.A.3.2.7 |
| TC | MGYG000002760_1 | MGYG000002760_1_11 | 17529 | 17822 | + | 4.A.3.2.6 |
| TC | MGYG000002760_1 | MGYG000002760_1_12 | 17832 | 19052 | + | 4.A.3.2.6 |
| CAZyme | MGYG000002760_1 | MGYG000002760_1_13 | 19183 | 20637 | + | GH1 |
Gene ID: MGYG000002760_1_10
Type: TC
Location: 17156 - 17482 (+)
Type: TC
Location: 17156 - 17482 (+)
Gene ID: MGYG000002760_1_11
Type: TC
Location: 17529 - 17822 (+)
Type: TC
Location: 17529 - 17822 (+)
Gene ID: MGYG000002760_1_12
Type: TC
Location: 17832 - 19052 (+)
Type: TC
Location: 17832 - 19052 (+)
Gene ID: MGYG000002760_1_13
Type: CAZyme
Location: 19183 - 20637 (+)
Type: CAZyme
Location: 19183 - 20637 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AL
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002760_1_10 | vegetarian > vegan | 1.37345 | 0.04738 |
| MGYG000002760_1_11 | vegetarian > vegan | 2.08066 | 0.04738 |
| MGYG000002760_1_12 | vegetarian > vegan | 1.87139 | 0.04738 |
| MGYG000002760_1_13 | vegetarian > vegan | 2.11616 | 0.04014 |