Cluster: MGYG000002752_CGC2
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002752
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002752_6 | MGYG000002752_6_11 | 14888 | 17338 | - | 4.A.1.1.8 |
| NULL(UNKNOWN) | MGYG000002752_6 | MGYG000002752_6_12 | 17360 | 17479 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000002752_6 | MGYG000002752_6_13 | 17563 | 18282 | + | GntR |
| TC | MGYG000002752_6 | MGYG000002752_6_14 | 18589 | 19905 | + | 3.A.1.1.45 |
| TC | MGYG000002752_6 | MGYG000002752_6_15 | 19993 | 20847 | + | 3.A.1.1.45 |
| TC | MGYG000002752_6 | MGYG000002752_6_16 | 20847 | 21686 | + | 3.A.1.1.45 |
| TC | MGYG000002752_6 | MGYG000002752_6_17 | 21755 | 22954 | + | 3.A.1.1.22 |
| CAZyme | MGYG000002752_6 | MGYG000002752_6_18 | 23411 | 25678 | - | GT35 |
| CAZyme | MGYG000002752_6 | MGYG000002752_6_19 | 25807 | 27312 | - | GH77 |
Gene ID: MGYG000002752_6_11
Type: TC
Location: 14888 - 17338 (-)
Type: TC
Location: 14888 - 17338 (-)
Gene ID: MGYG000002752_6_12
Type:
Location: 17360 - 17479 (+)
Type:
Location: 17360 - 17479 (+)
Gene ID: MGYG000002752_6_13
Type: TF
Location: 17563 - 18282 (+)
Type: TF
Location: 17563 - 18282 (+)
Gene ID: MGYG000002752_6_14
Type: TC
Location: 18589 - 19905 (+)
Type: TC
Location: 18589 - 19905 (+)
Gene ID: MGYG000002752_6_15
Type: TC
Location: 19993 - 20847 (+)
Type: TC
Location: 19993 - 20847 (+)
Gene ID: MGYG000002752_6_16
Type: TC
Location: 20847 - 21686 (+)
Type: TC
Location: 20847 - 21686 (+)
Gene ID: MGYG000002752_6_17
Type: TC
Location: 21755 - 22954 (+)
Type: TC
Location: 21755 - 22954 (+)
Gene ID: MGYG000002752_6_18
Type: CAZyme
Location: 23411 - 25678 (-)
Type: CAZyme
Location: 23411 - 25678 (-)
Gene ID: MGYG000002752_6_19
Type: CAZyme
Location: 25807 - 27312 (-)
Type: CAZyme
Location: 25807 - 27312 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900556605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.