Cluster: MGYG000002751_CGC1
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002751
- CGC Family ID: CGCFAM_00024
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002751_1 | MGYG000002751_1_100 | 102109 | 103485 | - | GH13_20 |
| TC | MGYG000002751_1 | MGYG000002751_1_101 | 103639 | 104835 | - | 2.A.1.2.18 |
| TC | MGYG000002751_1 | MGYG000002751_1_102 | 104957 | 107317 | - | 9.A.8.1.6 |
| peptidase | MGYG000002751_1 | MGYG000002751_1_103 | 107729 | 108631 | - | S09.UPW |
| TC | MGYG000002751_1 | MGYG000002751_1_104 | 108879 | 109442 | + | 4.A.1.2.6 |
| TC | MGYG000002751_1 | MGYG000002751_1_105 | 109677 | 111611 | + | 9.B.97.5.1 |
| pfam | MGYG000002751_1 | MGYG000002751_1_106 | 111748 | 113151 | + | tRNA-synt_2 | tRNA_anti-codon |
| NULL(UNKNOWN) | MGYG000002751_1 | MGYG000002751_1_107 | 113402 | 114190 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002751_1 | MGYG000002751_1_108 | 114350 | 115330 | + | 3.A.1.34.1 |
| TC | MGYG000002751_1 | MGYG000002751_1_109 | 115535 | 116458 | + | 3.A.1.34.1 |
| TC | MGYG000002751_1 | MGYG000002751_1_110 | 116451 | 117245 | + | 3.A.1.34.1 |
| NULL(UNKNOWN) | MGYG000002751_1 | MGYG000002751_1_111 | 117242 | 117349 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002751_1 | MGYG000002751_1_112 | 117523 | 118290 | + | 1.A.23.4.2 |
| pfam | MGYG000002751_1 | MGYG000002751_1_113 | 118384 | 120300 | + | Bmp |
| pfam | MGYG000002751_1 | MGYG000002751_1_114 | 120297 | 121007 | + | Metallophos | Metallophos_2 |
| TC | MGYG000002751_1 | MGYG000002751_1_115 | 121295 | 122002 | - | 1.C.82.1.1 |
Gene ID: MGYG000002751_1_100
Type: CAZyme
Location: 102109 - 103485 (-)
Type: CAZyme
Location: 102109 - 103485 (-)
Gene ID: MGYG000002751_1_101
Type: TC
Location: 103639 - 104835 (-)
Type: TC
Location: 103639 - 104835 (-)
Gene ID: MGYG000002751_1_102
Type: TC
Location: 104957 - 107317 (-)
Type: TC
Location: 104957 - 107317 (-)
Gene ID: MGYG000002751_1_103
Type: peptidase
Location: 107729 - 108631 (-)
Type: peptidase
Location: 107729 - 108631 (-)
Gene ID: MGYG000002751_1_104
Type: TC
Location: 108879 - 109442 (+)
Type: TC
Location: 108879 - 109442 (+)
Gene ID: MGYG000002751_1_105
Type: TC
Location: 109677 - 111611 (+)
Type: TC
Location: 109677 - 111611 (+)
Gene ID: MGYG000002751_1_106
Type: pfam
Location: 111748 - 113151 (+)
Type: pfam
Location: 111748 - 113151 (+)
Gene ID: MGYG000002751_1_107
Type:
Location: 113402 - 114190 (+)
Type:
Location: 113402 - 114190 (+)
Gene ID: MGYG000002751_1_108
Type: TC
Location: 114350 - 115330 (+)
Type: TC
Location: 114350 - 115330 (+)
Gene ID: MGYG000002751_1_109
Type: TC
Location: 115535 - 116458 (+)
Type: TC
Location: 115535 - 116458 (+)
Gene ID: MGYG000002751_1_110
Type: TC
Location: 116451 - 117245 (+)
Type: TC
Location: 116451 - 117245 (+)
Gene ID: MGYG000002751_1_111
Type:
Location: 117242 - 117349 (-)
Type:
Location: 117242 - 117349 (-)
Gene ID: MGYG000002751_1_112
Type: TC
Location: 117523 - 118290 (+)
Type: TC
Location: 117523 - 118290 (+)
Gene ID: MGYG000002751_1_113
Type: pfam
Location: 118384 - 120300 (+)
Type: pfam
Location: 118384 - 120300 (+)
Gene ID: MGYG000002751_1_114
Type: pfam
Location: 120297 - 121007 (+)
Type: pfam
Location: 120297 - 121007 (+)
Gene ID: MGYG000002751_1_115
Type: TC
Location: 121295 - 122002 (-)
Type: TC
Location: 121295 - 122002 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900551815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002751_1_105 | vegan > omnivore | 1.34027 | 0.00701 |
| MGYG000002751_1_105 | vegetarian > omnivore | 1.41553 | 0.02695 |