Cluster: MGYG000002744_CGC7
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate: host glycan
- Genome ID: MGYG000002744
- CGC Family ID: CGCFAM_00014
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002744_10 | MGYG000002744_10_8 | 7391 | 7729 | - | 4.A.3.1.2 |
| TF | MGYG000002744_10 | MGYG000002744_10_9 | 7943 | 8947 | - | LacI |
| TC | MGYG000002744_10 | MGYG000002744_10_10 | 9304 | 11052 | + | 4.A.3.1.1 |
| CAZyme | MGYG000002744_10 | MGYG000002744_10_11 | 11119 | 12558 | + | GH1 |
| TF | MGYG000002744_10 | MGYG000002744_10_12 | 12909 | 13919 | - | LacI |
| TC | MGYG000002744_10 | MGYG000002744_10_13 | 14195 | 15973 | + | 4.A.3.1.1 |
| CAZyme | MGYG000002744_10 | MGYG000002744_10_14 | 16049 | 17470 | + | GH1 |
| STP | MGYG000002744_10 | MGYG000002744_10_15 | 18077 | 18472 | - | DeoRC |
| TC | MGYG000002744_10 | MGYG000002744_10_16 | 18635 | 20329 | - | 4.A.3.1.1 |
Gene ID: MGYG000002744_10_8
Type: TC
Location: 7391 - 7729 (-)
Type: TC
Location: 7391 - 7729 (-)
Gene ID: MGYG000002744_10_9
Type: TF
Location: 7943 - 8947 (-)
Type: TF
Location: 7943 - 8947 (-)
Gene ID: MGYG000002744_10_10
Type: TC
Location: 9304 - 11052 (+)
Type: TC
Location: 9304 - 11052 (+)
Gene ID: MGYG000002744_10_11
Type: CAZyme
Location: 11119 - 12558 (+)
Type: CAZyme
Location: 11119 - 12558 (+)
Gene ID: MGYG000002744_10_12
Type: TF
Location: 12909 - 13919 (-)
Type: TF
Location: 12909 - 13919 (-)
Gene ID: MGYG000002744_10_13
Type: TC
Location: 14195 - 15973 (+)
Type: TC
Location: 14195 - 15973 (+)
Gene ID: MGYG000002744_10_14
Type: CAZyme
Location: 16049 - 17470 (+)
Type: CAZyme
Location: 16049 - 17470 (+)
Gene ID: MGYG000002744_10_15
Type: STP
Location: 18077 - 18472 (-)
Type: STP
Location: 18077 - 18472 (-)
Gene ID: MGYG000002744_10_16
Type: TC
Location: 18635 - 20329 (-)
Type: TC
Location: 18635 - 20329 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900544865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.