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Cluster: MGYG000002742_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002742_57 MGYG000002742_57_1 29 1414 - 4.A.3.1.1
TF MGYG000002742_57 MGYG000002742_57_2 1690 2700 + LacI
TC MGYG000002742_57 MGYG000002742_57_3 3038 4798 - 4.A.3.1.1
CAZyme MGYG000002742_57 MGYG000002742_57_4 4975 6417 - GH1
TF MGYG000002742_57 MGYG000002742_57_5 6759 7796 + LacI
CAZyme MGYG000002742_57 MGYG000002742_57_6 8061 9500 - GH1
TC MGYG000002742_57 MGYG000002742_57_7 9567 11333 - 4.A.3.1.1
TF MGYG000002742_57 MGYG000002742_57_8 11690 12694 + LacI
TC MGYG000002742_57 MGYG000002742_57_9 12909 13247 + 4.A.3.1.2
Gene ID: MGYG000002742_57_1
Type: TC
Location: 29 - 1414 (-)
Gene ID: MGYG000002742_57_2
Type: TF
Location: 1690 - 2700 (+)
Gene ID: MGYG000002742_57_3
Type: TC
Location: 3038 - 4798 (-)
Gene ID: MGYG000002742_57_4
Type: CAZyme
Location: 4975 - 6417 (-)
Gene ID: MGYG000002742_57_5
Type: TF
Location: 6759 - 7796 (+)
Gene ID: MGYG000002742_57_6
Type: CAZyme
Location: 8061 - 9500 (-)
Gene ID: MGYG000002742_57_7
Type: TC
Location: 9567 - 11333 (-)
Gene ID: MGYG000002742_57_8
Type: TF
Location: 11690 - 12694 (+)
Gene ID: MGYG000002742_57_9
Type: TC
Location: 12909 - 13247 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002742_57_5 vegetarian > omnivore 1.13976 0.01867

🧭 Explore Read Mapping of CGC

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