dbCAN Logo

Cluster: MGYG000002740_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002740_41 MGYG000002740_41_1 3 2015 + 9.A.8.1.6
TC MGYG000002740_41 MGYG000002740_41_2 2330 3994 + 4.A.1.1.3
TF MGYG000002740_41 MGYG000002740_41_3 4057 4809 - HTH_6
CAZyme MGYG000002740_41 MGYG000002740_41_4 4985 6358 + GH4
NULL(UNKNOWN) MGYG000002740_41 MGYG000002740_41_5 6524 7276 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000002740_41 MGYG000002740_41_6 7452 8648 + 2.A.1.2.18
CAZyme MGYG000002740_41 MGYG000002740_41_7 8803 10179 + GH13_20
Gene ID: MGYG000002740_41_1
Type: TC
Location: 3 - 2015 (+)
Gene ID: MGYG000002740_41_2
Type: TC
Location: 2330 - 3994 (+)
Gene ID: MGYG000002740_41_3
Type: TF
Location: 4057 - 4809 (-)
Gene ID: MGYG000002740_41_4
Type: CAZyme
Location: 4985 - 6358 (+)
Gene ID: MGYG000002740_41_5
Type:
Location: 6524 - 7276 (+)
Gene ID: MGYG000002740_41_6
Type: TC
Location: 7452 - 8648 (+)
Gene ID: MGYG000002740_41_7
Type: CAZyme
Location: 8803 - 10179 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002740_41_4 vegan > omnivore 1.00912 0.01057
MGYG000002740_41_5 vegan > omnivore 1.30868 0.01057

🧭 Explore Read Mapping of CGC

← Back to Cluster List