Cluster: MGYG000002733_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002733
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002733_6 | MGYG000002733_6_43 | 58038 | 60365 | - | 9.A.8.1.6 |
| TC | MGYG000002733_6 | MGYG000002733_6_44 | 60489 | 60710 | - | 9.A.8.1.6 |
| STP | MGYG000002733_6 | MGYG000002733_6_45 | 60750 | 60992 | - | FeoA |
| STP | MGYG000002733_6 | MGYG000002733_6_46 | 61228 | 61476 | - | PTS-HPr |
| TC | MGYG000002733_6 | MGYG000002733_6_47 | 61897 | 63360 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | MGYG000002733_6 | MGYG000002733_6_48 | 63514 | 63969 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002733_6 | MGYG000002733_6_49 | 63973 | 66981 | - | GH2 |
Gene ID: MGYG000002733_6_43
Type: TC
Location: 58038 - 60365 (-)
Type: TC
Location: 58038 - 60365 (-)
Gene ID: MGYG000002733_6_44
Type: TC
Location: 60489 - 60710 (-)
Type: TC
Location: 60489 - 60710 (-)
Gene ID: MGYG000002733_6_45
Type: STP
Location: 60750 - 60992 (-)
Type: STP
Location: 60750 - 60992 (-)
Gene ID: MGYG000002733_6_46
Type: STP
Location: 61228 - 61476 (-)
Type: STP
Location: 61228 - 61476 (-)
Gene ID: MGYG000002733_6_47
Type: TC
Location: 61897 - 63360 (-)
Type: TC
Location: 61897 - 63360 (-)
Gene ID: MGYG000002733_6_48
Type:
Location: 63514 - 63969 (-)
Type:
Location: 63514 - 63969 (-)
Gene ID: MGYG000002733_6_49
Type: CAZyme
Location: 63973 - 66981 (-)
Type: CAZyme
Location: 63973 - 66981 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900549335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.