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Cluster: MGYG000002711_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002711_18 MGYG000002711_18_18 16547 18799 - GH28
CAZyme MGYG000002711_18 MGYG000002711_18_19 18818 20845 - GH28
NULL(UNKNOWN) MGYG000002711_18 MGYG000002711_18_20 21102 24320 + NULL(UNKNOWN)
[View Structural Homologs]
STP MGYG000002711_18 MGYG000002711_18_21 24327 25694 + SBP_bac_1
TC MGYG000002711_18 MGYG000002711_18_22 25750 26679 + 3.A.1.1.11
TC MGYG000002711_18 MGYG000002711_18_23 26700 27599 + 3.A.1.1.11
TF MGYG000002711_18 MGYG000002711_18_24 27892 29196 + HTH_AraC | HTH_AraC
STP MGYG000002711_18 MGYG000002711_18_25 29193 31991 + HATPase_c | dCache_1
CAZyme MGYG000002711_18 MGYG000002711_18_26 32046 33308 - GH109
Gene ID: MGYG000002711_18_18
Type: CAZyme
Location: 16547 - 18799 (-)
Gene ID: MGYG000002711_18_19
Type: CAZyme
Location: 18818 - 20845 (-)
Gene ID: MGYG000002711_18_20
Type:
Location: 21102 - 24320 (+)
Gene ID: MGYG000002711_18_21
Type: STP
Location: 24327 - 25694 (+)
Gene ID: MGYG000002711_18_22
Type: TC
Location: 25750 - 26679 (+)
Gene ID: MGYG000002711_18_23
Type: TC
Location: 26700 - 27599 (+)
Gene ID: MGYG000002711_18_24
Type: TF
Location: 27892 - 29196 (+)
Gene ID: MGYG000002711_18_25
Type: STP
Location: 29193 - 31991 (+)
Gene ID: MGYG000002711_18_26
Type: CAZyme
Location: 32046 - 33308 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002711_18_25 vegetarian > vegan 1.65004 0.01247

🧭 Explore Read Mapping of CGC

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