Cluster: MGYG000002711_CGC17
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000002711
- CGC Family ID: CGCFAM_03912
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002711_8 | MGYG000002711_8_66 | 88403 | 89308 | - | 3.A.1.1.39 |
| TC | MGYG000002711_8 | MGYG000002711_8_67 | 89310 | 90221 | - | 3.A.1.1.4 |
| STP | MGYG000002711_8 | MGYG000002711_8_68 | 90233 | 93088 | - | SBP_bac_1 |
| CAZyme | MGYG000002711_8 | MGYG000002711_8_69 | 93163 | 95883 | - | CBM67 | GH78 |
| TF | MGYG000002711_8 | MGYG000002711_8_70 | 96241 | 97092 | + | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000002711_8 | MGYG000002711_8_71 | 97117 | 99822 | - | GH146 |
| TF | MGYG000002711_8 | MGYG000002711_8_72 | 99935 | 100846 | + | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000002711_8 | MGYG000002711_8_73 | 100895 | 104032 | - | GH38 |
| NULL(UNKNOWN) | MGYG000002711_8 | MGYG000002711_8_74 | 104169 | 107840 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002711_8 | MGYG000002711_8_75 | 107903 | 108862 | - | 3.A.1.1.32 |
| TC | MGYG000002711_8 | MGYG000002711_8_76 | 108881 | 109810 | - | 3.A.1.1.11 |
| pfam | MGYG000002711_8 | MGYG000002711_8_77 | 109825 | 112440 | - | DUF5696 |
| pfam | MGYG000002711_8 | MGYG000002711_8_78 | 112458 | 114584 | - | NHL | Yip1 |
| TC | MGYG000002711_8 | MGYG000002711_8_79 | 114598 | 115491 | - | 3.A.1.1.48 |
| TC | MGYG000002711_8 | MGYG000002711_8_80 | 115552 | 116472 | - | 3.A.1.1.11 |
Gene ID: MGYG000002711_8_66
Type: TC
Location: 88403 - 89308 (-)
Type: TC
Location: 88403 - 89308 (-)
Gene ID: MGYG000002711_8_67
Type: TC
Location: 89310 - 90221 (-)
Type: TC
Location: 89310 - 90221 (-)
Gene ID: MGYG000002711_8_68
Type: STP
Location: 90233 - 93088 (-)
Type: STP
Location: 90233 - 93088 (-)
Gene ID: MGYG000002711_8_69
Type: CAZyme
Location: 93163 - 95883 (-)
Type: CAZyme
Location: 93163 - 95883 (-)
Gene ID: MGYG000002711_8_70
Type: TF
Location: 96241 - 97092 (+)
Type: TF
Location: 96241 - 97092 (+)
Gene ID: MGYG000002711_8_71
Type: CAZyme
Location: 97117 - 99822 (-)
Type: CAZyme
Location: 97117 - 99822 (-)
Gene ID: MGYG000002711_8_72
Type: TF
Location: 99935 - 100846 (+)
Type: TF
Location: 99935 - 100846 (+)
Gene ID: MGYG000002711_8_73
Type: CAZyme
Location: 100895 - 104032 (-)
Type: CAZyme
Location: 100895 - 104032 (-)
Gene ID: MGYG000002711_8_74
Type:
Location: 104169 - 107840 (-)
Type:
Location: 104169 - 107840 (-)
Gene ID: MGYG000002711_8_75
Type: TC
Location: 107903 - 108862 (-)
Type: TC
Location: 107903 - 108862 (-)
Gene ID: MGYG000002711_8_76
Type: TC
Location: 108881 - 109810 (-)
Type: TC
Location: 108881 - 109810 (-)
Gene ID: MGYG000002711_8_77
Type: pfam
Location: 109825 - 112440 (-)
Type: pfam
Location: 109825 - 112440 (-)
Gene ID: MGYG000002711_8_78
Type: pfam
Location: 112458 - 114584 (-)
Type: pfam
Location: 112458 - 114584 (-)
Gene ID: MGYG000002711_8_79
Type: TC
Location: 114598 - 115491 (-)
Type: TC
Location: 114598 - 115491 (-)
Gene ID: MGYG000002711_8_80
Type: TC
Location: 115552 - 116472 (-)
Type: TC
Location: 115552 - 116472 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS856
Species
UMGS856 sp900546265
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.