Cluster: MGYG000002710_CGC1
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000002710
- CGC Family ID: CGCFAM_00076
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002710_1 | MGYG000002710_1_57 | 54821 | 55915 | - | GT4 |
| pfam | MGYG000002710_1 | MGYG000002710_1_58 | 56080 | 57027 | - | ATPgrasp_TupA |
| pfam | MGYG000002710_1 | MGYG000002710_1_59 | 57024 | 58262 | - | Wzy_C |
| CAZyme | MGYG000002710_1 | MGYG000002710_1_60 | 58259 | 59368 | - | GT4 |
| CAZyme | MGYG000002710_1 | MGYG000002710_1_61 | 59368 | 60411 | - | GT4 |
| CAZyme | MGYG000002710_1 | MGYG000002710_1_62 | 60416 | 61180 | - | GT2 |
| TC | MGYG000002710_1 | MGYG000002710_1_63 | 61186 | 61920 | - | 9.B.18.1.2 |
| pfam | MGYG000002710_1 | MGYG000002710_1_64 | 61929 | 63212 | - | DegT_DnrJ_EryC1 |
| TC | MGYG000002710_1 | MGYG000002710_1_65 | 63265 | 65238 | - | 9.B.18.2.1 |
Gene ID: MGYG000002710_1_57
Type: CAZyme
Location: 54821 - 55915 (-)
Type: CAZyme
Location: 54821 - 55915 (-)
Gene ID: MGYG000002710_1_58
Type: pfam
Location: 56080 - 57027 (-)
Type: pfam
Location: 56080 - 57027 (-)
Gene ID: MGYG000002710_1_59
Type: pfam
Location: 57024 - 58262 (-)
Type: pfam
Location: 57024 - 58262 (-)
Gene ID: MGYG000002710_1_60
Type: CAZyme
Location: 58259 - 59368 (-)
Type: CAZyme
Location: 58259 - 59368 (-)
Gene ID: MGYG000002710_1_61
Type: CAZyme
Location: 59368 - 60411 (-)
Type: CAZyme
Location: 59368 - 60411 (-)
Gene ID: MGYG000002710_1_62
Type: CAZyme
Location: 60416 - 61180 (-)
Type: CAZyme
Location: 60416 - 61180 (-)
Gene ID: MGYG000002710_1_63
Type: TC
Location: 61186 - 61920 (-)
Type: TC
Location: 61186 - 61920 (-)
Gene ID: MGYG000002710_1_64
Type: pfam
Location: 61929 - 63212 (-)
Type: pfam
Location: 61929 - 63212 (-)
Gene ID: MGYG000002710_1_65
Type: TC
Location: 63265 - 65238 (-)
Type: TC
Location: 63265 - 65238 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp937967235
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002710_1_59 | vegetarian > omnivore | 1.34443 | 0.00565 |
| MGYG000002710_1_59 | vegetarian > vegan | 1.73326 | 0.00022 |
| MGYG000002710_1_60 | vegetarian > omnivore | 1.67062 | 0.00565 |
| MGYG000002710_1_60 | vegetarian > vegan | 1.23378 | 0.00022 |
| MGYG000002710_1_61 | vegetarian > omnivore | 1.36868 | 0.00565 |
| MGYG000002710_1_61 | vegetarian > vegan | 2.72118 | 0.00022 |
| MGYG000002710_1_62 | vegetarian > omnivore | 2.86803 | 0.00565 |
| MGYG000002710_1_62 | vegetarian > vegan | 1.79134 | 0.00022 |
| MGYG000002710_1_63 | vegetarian > omnivore | 2.80369 | 0.00565 |
| MGYG000002710_1_63 | vegetarian > vegan | 1.66416 | 0.00022 |
| MGYG000002710_1_64 | vegetarian > omnivore | 1.62611 | 0.00565 |
| MGYG000002710_1_64 | vegetarian > vegan | 1.06678 | 0.00022 |