Cluster: MGYG000002707_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002707
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002707_4 | MGYG000002707_4_39 | 38393 | 39640 | - | GT76 |
| pfam | MGYG000002707_4 | MGYG000002707_4_40 | 39644 | 40564 | - | Formyl_trans_N | Formyl_trans_C |
| pfam | MGYG000002707_4 | MGYG000002707_4_41 | 40561 | 41064 | - | Pep_deformylase |
| TC | MGYG000002707_4 | MGYG000002707_4_42 | 41076 | 43553 | - | 3.A.11.3.1 |
Gene ID: MGYG000002707_4_39
Type: CAZyme
Location: 38393 - 39640 (-)
Type: CAZyme
Location: 38393 - 39640 (-)
Gene ID: MGYG000002707_4_40
Type: pfam
Location: 39644 - 40564 (-)
Type: pfam
Location: 39644 - 40564 (-)
Gene ID: MGYG000002707_4_41
Type: pfam
Location: 40561 - 41064 (-)
Type: pfam
Location: 40561 - 41064 (-)
Gene ID: MGYG000002707_4_42
Type: TC
Location: 41076 - 43553 (-)
Type: TC
Location: 41076 - 43553 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter_A
Species
Lawsonibacter_A hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002707_4_40 | vegetarian > vegan | 1.02741 | 0.00460 |
| MGYG000002707_4_41 | vegetarian > vegan | 1.76378 | 0.00460 |