Cluster: MGYG000002707_CGC24
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: MGYG000002707
- CGC Family ID: CGCFAM_00010
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002707_39 | MGYG000002707_39_2 | 1749 | 3239 | - | GH77 |
| TF | MGYG000002707_39 | MGYG000002707_39_3 | 3266 | 4285 | - | LacI |
| TC | MGYG000002707_39 | MGYG000002707_39_4 | 4318 | 5166 | - | 3.A.1.1.45 |
| TC | MGYG000002707_39 | MGYG000002707_39_5 | 5166 | 6017 | - | 3.A.1.1.45 |
| TC | MGYG000002707_39 | MGYG000002707_39_6 | 6191 | 7531 | - | 3.A.1.1.45 |
| STP | MGYG000002707_39 | MGYG000002707_39_7 | 7855 | 8445 | + | TetR_N |
| TC | MGYG000002707_39 | MGYG000002707_39_8 | 8649 | 10190 | + | 2.A.21.2.3 |
Gene ID: MGYG000002707_39_2
Type: CAZyme
Location: 1749 - 3239 (-)
Type: CAZyme
Location: 1749 - 3239 (-)
Gene ID: MGYG000002707_39_3
Type: TF
Location: 3266 - 4285 (-)
Type: TF
Location: 3266 - 4285 (-)
Gene ID: MGYG000002707_39_4
Type: TC
Location: 4318 - 5166 (-)
Type: TC
Location: 4318 - 5166 (-)
Gene ID: MGYG000002707_39_5
Type: TC
Location: 5166 - 6017 (-)
Type: TC
Location: 5166 - 6017 (-)
Gene ID: MGYG000002707_39_6
Type: TC
Location: 6191 - 7531 (-)
Type: TC
Location: 6191 - 7531 (-)
Gene ID: MGYG000002707_39_7
Type: STP
Location: 7855 - 8445 (+)
Type: STP
Location: 7855 - 8445 (+)
Gene ID: MGYG000002707_39_8
Type: TC
Location: 8649 - 10190 (+)
Type: TC
Location: 8649 - 10190 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter_A
Species
Lawsonibacter_A hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.